RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TBC1D25Q3MII6 688 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 AFMIDQ63HM1 303 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 ERAP2Q6P179 960 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 PLA2G15Q8NCC3 412 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 SNIP1Q8TAD8 396 aaKnown RBP17.16■□□□□ 0.34
CCDC9-202ENST00000595659 HCAR2Q8TDS4 363 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 HSPH1Q92598 858 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 NSMCE3Q96MG7 304 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 APOOQ9BUR5 198 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 BOCQ9BWV1 1114 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 ATP13A3Q9H7F0 1226 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 SYNDIG1Q9H7V2 258 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 SIRPGQ9P1W8 387 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 DOLKQ9UPQ8 538 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 ATP8A1Q9Y2Q0 1164 aa17.16■□□□□ 0.34
CCDC9-202ENST00000595659 ARID1BQ8NFD5 2236 aaPredicted RBP17.16■□□□□ 0.34
CCDC9-202ENST00000595659 A0A1W2PQC6 194 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 EME2A4GXA9 379 aaPredicted RBP17.15■□□□□ 0.34
CCDC9-202ENST00000595659 LMO7DNF2Z398 122 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 TPP1O14773 563 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 CTSEP14091 401 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 SERPINA4P29622 427 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 PRKCIP41743 596 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 SCNN1BP51168 640 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 SUOXP51687 545 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 NR1I3Q14994 352 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 ISXQ2M1V0 245 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 C6orf132Q5T0Z8 1188 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 KCTD16Q68DU8 428 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 BRAT1Q6PJG6 821 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 FNIP1Q8TF40 1166 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 ATXN7L3BQ96GX2 97 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 TUBGCP5Q96RT8 1024 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 ZWILCHQ9H900 591 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 NCKIPSDQ9NZQ3 722 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 LOC400499M0QZD8 3231 aa17.15■□□□□ 0.34
CCDC9-202ENST00000595659 TRPM6Q9BX84 2022 aa17.14■□□□□ 0.34
CCDC9-202ENST00000595659 PMS2P1A4D2B8 440 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 EIF3CLB5ME19 914 aaKnown RBP17.14■□□□□ 0.33
CCDC9-202ENST00000595659 AMPD1P23109 780 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 MMP12P39900 470 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 CSNK1DP48730 415 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 RPIAP49247 311 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 HK3P52790 923 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 BCL2L1Q07817 233 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 IL10RBQ08334 325 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 SLC10A7Q0GE19 358 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 RALGDSQ12967 914 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 DPYSQ14117 519 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 NFATC4Q14934 902 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 IQCB1Q15051 598 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 C3orf38Q5JPI3 329 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 TXNRD3NBQ6F5E7 133 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 FOXR1Q6PIV2 292 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 SPACA3Q8IXA5 215 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 BTBD6Q96KE9 485 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 LGMNQ99538 433 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 EIF3CQ99613 913 aaKnown RBP17.14■□□□□ 0.33
CCDC9-202ENST00000595659 CCDC3Q9BQI4 270 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCDC9-202ENST00000595659 PRORYQ9H606 182 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 ETNK2Q9NVF9 386 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 PADI4Q9UM07 663 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 SATB2Q9UPW6 733 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 SCINQ9Y6U3 715 aa17.14■□□□□ 0.33
CCDC9-202ENST00000595659 ACACAQ13085 2346 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 A0A1W2PNU3 283 aaPredicted RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 TOR1BO14657 336 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 RECQL5O94762 991 aaPredicted RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 LSSP48449 732 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 PEX5P50542 639 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 BLKP51451 505 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 SRP54P61011 504 aaKnown RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 TDRD12Q587J7 1177 aaKnown RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 ESRP1Q6NXG1 681 aaKnown RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 KYQ8NBH2 561 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 PCDH19Q8TAB3 1148 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 CPLX3Q8WVH0 158 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 GLMNQ92990 594 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 EDEM3Q9BZQ6 932 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 POLR1BQ9H9Y6 1135 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 MRPL47Q9HD33 250 aaKnown RBP17.13■□□□□ 0.33
CCDC9-202ENST00000595659 KLQ9UEF7 1012 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 ENTPD2Q9Y5L3 495 aa17.13■□□□□ 0.33
CCDC9-202ENST00000595659 EIF4E1BA6NMX2 242 aaKnown RBP17.12■□□□□ 0.33
CCDC9-202ENST00000595659 H3BRJ5 948 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 RASGRP1O95267 797 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 ELFN1P0C7U0 828 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 MYBL1P10243 752 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 HTR1BP28222 390 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 HCAR3P49019 387 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 TLE3Q04726 772 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 ELOCQ15369 112 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 LIPIQ6XZB0 460 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 RBM44Q6ZP01 1051 aaKnown RBP17.12■□□□□ 0.33
CCDC9-202ENST00000595659 LUZP1Q86V48 1076 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms