RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PIP4P1Q86T03 277 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 CCDC13Q8IYE1 715 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 MREGQ8N565 214 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 PCDH20Q8N6Y1 951 aaKnown RBP12.03□□□□□ -0.48
DDX39A-219ENST00000592927 GLIS1Q8NBF1 620 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 TSTD1Q8NFU3 115 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 FRS2Q8WU20 508 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 ERLEC1Q96DZ1 483 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 CRELD1Q96HD1 420 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 SPATA13Q96N96 652 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 UBL7Q96S82 380 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-219ENST00000592927 LGMNQ99538 433 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 FRMD8Q9BZ67 464 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-219ENST00000592927 PHACTR1Q9C0D0 580 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 NEUROG2Q9H2A3 272 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 INVSQ9Y283 1065 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
DDX39A-219ENST00000592927 TENM4Q6N022 2769 aa12.03□□□□□ -0.48
DDX39A-219ENST00000592927 A0A1W2PQF6 199 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 MATN3O15232 486 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 BNIP3LO60238 219 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 SIN3BO75182 1162 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 TMCC1O94876 653 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 APBB3O95704 486 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ZSCAN5DPP0CG00 497 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ETS1P14921 441 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 VAV1P15498 845 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 MAGEA6P43360 314 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 MAPK8P45983 427 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 FAM193AP78312 1265 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 CAMK2GQ13555 558 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 LBRQ14739 615 aaKnown RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 CYTH1Q15438 398 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 C9orf64Q5T6V5 341 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 RNASEH2BQ5TBB1 312 aaKnown RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 TMCO4Q5TGY1 634 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 PPP1R21Q6ZMI0 780 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ARHGEF18Q6ZSZ5 1173 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 Q6ZVU0 165 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 BBS5Q8N3I7 341 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 LRRN4Q8WUT4 740 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 PTPRN2Q92932 1015 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 ISG20Q96AZ6 181 aaKnown RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 HHIPQ96QV1 700 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 CINPQ9BW66 212 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 TNKS2Q9H2K2 1166 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 MTG2Q9H4K7 406 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 C10orf88Q9H8K7 445 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 FBRSQ9HAH7 460 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 PRSS16Q9NQE7 514 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 SEPT3Q9UH03 358 aa12.02□□□□□ -0.49
DDX39A-219ENST00000592927 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-219ENST00000592927 MYO18AQ92614 2054 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 TK2O00142 265 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 RNF103O00237 685 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 TP73O15350 636 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 RNASEH1O60930 286 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 NEBLO76041 1014 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 PEX11BO96011 259 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 GSRP00390 522 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 FAM153BP0C7A2 387 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 HSPA9P38646 679 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 TNNT3P45378 269 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 RENBPP51606 427 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 RHOAP61586 193 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 SNRPD1P62314 119 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 IFI35P80217 286 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 CDK16Q00536 496 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 SLC10A7Q0GE19 358 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 WASHC5Q12768 1159 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 ELAVL3Q14576 367 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF235Q14590 738 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 PARP6Q2NL67 630 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 FAM153CQ494X1 144 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 TEX44Q53QW1 395 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 CARD16Q5EG05 197 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 MARC1Q5VT66 337 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 ITPRIPL1Q6GPH6 555 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 CYP2U1Q7Z449 544 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 MTERF4Q7Z6M4 381 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 PRUNE1Q86TP1 453 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 STK40Q8N2I9 435 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 PGBD3Q8N328 593 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 RYBPQ8N488 228 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 ZCCHC9Q8N567 271 aaKnown RBP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 OR2T3Q8NH03 318 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 CCDC110Q8TBZ0 833 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms