RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GLMNQ92990 594 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 SUV39H2Q9H5I1 410 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 PCDH12Q9NPG4 1184 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 MRPL40Q9NQ50 206 aaKnown RBP11.73□□□□□ -0.53
LIG3-207ENST00000586119 FAM207AQ9NSI2 230 aaPredicted RBP11.73□□□□□ -0.53
LIG3-207ENST00000586119 GPATCH2LQ9NWQ4 482 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 NCKIPSDQ9NZQ3 722 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 ADAM22Q9P0K1 906 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 DKK3Q9UBP4 350 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 GPR34Q9UPC5 381 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 DOLKQ9UPQ8 538 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 MFHAS1Q9Y4C4 1052 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 DAAM1Q9Y4D1 1078 aa11.73□□□□□ -0.53
LIG3-207ENST00000586119 CXorf51AA0A1B0GTR3 108 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 TCRBV5S1A1TA0A578 114 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 A8MX80 341 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 RPLP0P05388 317 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 ITIH1P19827 911 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 ETV5P41161 510 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 LIG3P49916 1009 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 SRP54P61011 504 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 RPL7AP62424 266 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 NFKB2Q00653 900 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 OGDHQ02218 1023 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 TYRO3Q06418 890 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 SERINC3Q13530 473 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 UGP2Q16851 508 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 INO80DQ53TQ3 878 aaPredicted RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 RAB11FIP2Q7L804 512 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 TMPRSS9Q7Z410 1059 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 DNAAF5Q86Y56 855 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 JAMLQ86YT9 394 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 ARL14Q8N4G2 192 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 ARL10Q8N8L6 244 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 OR1E3Q8WZA6 343 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 NAT6Q93015 286 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 GRAMD1AQ96CP6 724 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 PDXPQ96GD0 296 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 CELF6Q96J87 481 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 TBATAQ96M53 351 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 SELENOOQ9BVL4 669 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 CPEB1Q9BZB8 566 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
LIG3-207ENST00000586119 LRRN3Q9H3W5 708 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 FZD10Q9ULW2 581 aa11.72□□□□□ -0.53
LIG3-207ENST00000586119 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 TMEM202A6NGA9 273 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 PLD2O14939 933 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 RASGRP1O95267 797 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 GM2AP17900 193 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 XPAP23025 273 aaPredicted RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 PEX5P50542 639 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 RAD51Q06609 339 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 NFATC4Q14934 902 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 KRT31Q15323 416 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 CA9Q16790 459 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 ZNF677Q86XU0 584 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 TP53INP2Q8IXH6 220 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 FSTL5Q8N475 847 aaPredicted RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 MED8Q96G25 268 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 GFM1Q96RP9 751 aaKnown RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 CCNL2Q96S94 520 aaPredicted RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 FUCA2Q9BTY2 467 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 LGR4Q9BXB1 951 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 SLC39A8Q9C0K1 460 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 RETREG1Q9H6L5 497 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 PDFQ9HBH1 243 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
LIG3-207ENST00000586119 PISDQ9UG56 409 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
LIG3-207ENST00000586119 MYO18BQ8IUG5 2567 aa11.71□□□□□ -0.54
LIG3-207ENST00000586119 TSPAN11A1L157 253 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 SYCE3A1L190 88 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 ZSCAN5CA6NGD5 496 aaPredicted RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 WASH4PA8MWX3 477 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 D6RAR5 112 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 SLC28A2O43868 658 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 TNFP01375 233 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 ITGA2BP08514 1039 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 INHBCP55103 352 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 RALGDSQ12967 914 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 ELOCQ15369 112 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 ARHGAP36Q6ZRI8 547 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 VASH2Q86V25 355 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 ZFAND4Q86XD8 727 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 PHF13Q86YI8 300 aaPredicted RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 TSEN2Q8NCE0 465 aaKnown RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 GPR156Q8NFN8 814 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 ENOX1Q8TC92 643 aaKnown RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 CCDC97Q96F63 343 aaPredicted RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 LIN37Q96GY3 246 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms