RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 HTR1BP28222 390 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 CCKBRP32239 447 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 KLK7P49862 253 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 LIG3P49916 1009 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 ZFP36L1Q07352 338 aaKnown RBP14.59□□□□□ -0.07
SDF2-202ENST00000585428 GRM3Q14832 879 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 NFATC4Q14934 902 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 ZSCAN23Q3MJ62 389 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 LINC00303Q3SY05 128 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 PARP15Q460N3 678 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 KCTD16Q68DU8 428 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 TRIM72Q6ZMU5 477 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 RD3Q7Z3Z2 195 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 GKN2Q86XP6 184 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 PHF13Q86YI8 300 aaPredicted RBP14.59□□□□□ -0.07
SDF2-202ENST00000585428 KYQ8NBH2 561 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 ZNF641Q96N77 438 aaPredicted RBP14.59□□□□□ -0.07
SDF2-202ENST00000585428 RBM15Q96T37 977 aaKnown RBP eCLIP14.59□□□□□ -0.07
SDF2-202ENST00000585428 LRRN3Q9H3W5 708 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 CLSTN2Q9H4D0 955 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 PCDH12Q9NPG4 1184 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 ADAM22Q9P0K1 906 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 SIRPGQ9P1W8 387 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 FZD10Q9ULW2 581 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 DAAM1Q9Y4D1 1078 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 OR1A2Q9Y585 309 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 DGKBQ9Y6T7 804 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 CFAP69A5D8W1 941 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 D6RAR5 112 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 EPHB6O15197 1021 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 PIGNO95427 931 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 TNFP01375 233 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 PNLIPP16233 465 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 GPD1P21695 349 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 ZNF143P52747 638 aaPredicted RBP14.58□□□□□ -0.08
SDF2-202ENST00000585428 INHBCP55103 352 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 POLR2FP61218 127 aaKnown RBP14.58□□□□□ -0.08
SDF2-202ENST00000585428 TGIF1Q15583 401 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 XKR5Q6UX68 686 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 ZSWIM9Q86XI8 627 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 ZNF354CQ86Y25 554 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 DNAAF5Q86Y56 855 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 PLA2G15Q8NCC3 412 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 C3orf20Q8ND61 904 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 TMEM74Q96NL1 305 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 FOXP3Q9BZS1 431 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 STRADBQ9C0K7 418 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 LRRC19Q9H756 370 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 PDFQ9HBH1 243 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.08
SDF2-202ENST00000585428 DACH1Q9UI36 760 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 CHD5Q8TDI0 1954 aa14.58□□□□□ -0.08
SDF2-202ENST00000585428 J3KR12 359 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 RPLP0P05388 317 aaKnown RBP14.57□□□□□ -0.08
SDF2-202ENST00000585428 HOXC4P09017 264 aaPredicted RBP14.57□□□□□ -0.08
SDF2-202ENST00000585428 KRT10P13645 584 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 GLB1P16278 677 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 XPAP23025 273 aaPredicted RBP14.57□□□□□ -0.08
SDF2-202ENST00000585428 TRIM23P36406 574 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 CSNK1DP48730 415 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 AIF1P55008 147 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 KCNC4Q03721 635 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 CLEC16AQ2KHT3 1053 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 SCYL2Q6P3W7 929 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 BRAT1Q6PJG6 821 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 CAMK1DQ8IU85 385 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 EXOC2Q96KP1 924 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 TUBGCP5Q96RT8 1024 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 SELENOOQ9BVL4 669 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 VPS16Q9H269 839 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 CLMPQ9H6B4 373 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 CATSPERBQ9H7T0 1116 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 EPB41L5Q9HCM4 733 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 NLRC4Q9NPP4 1024 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 TAB2Q9NYJ8 693 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 KLQ9UEF7 1012 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 RP1P56715 2156 aa14.57□□□□□ -0.08
SDF2-202ENST00000585428 TMEM202A6NGA9 273 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 CCP110O43303 1012 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 CREB3O43889 395 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 PRAMEF11O60813 436 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 CALB1P05937 261 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 HGFP14210 728 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 MMP12P39900 470 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 STAT1P42224 750 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 NSFP46459 744 aaKnown RBP14.56□□□□□ -0.08
SDF2-202ENST00000585428 NDST2P52849 883 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 RPL7AP62424 266 aaKnown RBP14.56□□□□□ -0.08
SDF2-202ENST00000585428 MTM1Q13496 603 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 TCEA2Q15560 299 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 EFHC2Q5JST6 749 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 CDKAL1Q5VV42 579 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 ERAP2Q6P179 960 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 MON1BQ7L1V2 547 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 ATL2Q8NHH9 583 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 ENOX1Q8TC92 643 aaKnown RBP14.56□□□□□ -0.08
SDF2-202ENST00000585428 OR1E3Q8WZA6 343 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
SDF2-202ENST00000585428 TMEM159Q96B96 161 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms