RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZDHHC11BP0C7U3 371 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 ATP5DP30049 168 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 IL12RB1P42701 662 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 MAGEA4P43358 317 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 TPMTP51580 245 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 CDK16Q00536 496 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 BNC1Q01954 994 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 PDIA2Q13087 525 aaKnown RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 EIF4EBP2Q13542 120 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 PRPSAP1Q14558 356 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 SUZ12Q15022 739 aaKnown RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 PRKD1Q15139 912 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 KCTD19Q17RG1 926 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 TIGD7Q6NT04 549 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 KLHDC10Q6PID8 442 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 GALNT15Q8N3T1 639 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 ARFGAP2Q8N6H7 521 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 GLIS1Q8NBF1 620 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 CADM4Q8NFZ8 388 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 FAM76AQ8TAV0 307 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 PIP4K2CQ8TBX8 421 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 PYROXD1Q8WU10 500 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 CPT1BQ92523 772 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 PLD4Q96BZ4 506 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 SLC39A13Q96H72 371 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 ATP6V1G3Q96LB4 118 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 PPP1R2P1Q96PQ5 205 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 SH3GL2Q99962 352 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 MAGEB5Q9BZ81 275 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 ROPN1BQ9BZX4 212 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 ZYG11BQ9C0D3 744 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 CDC42EP4Q9H3Q1 356 aaKnown RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 ROPN1Q9HAT0 212 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 OSER1Q9NX31 292 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 TOR4AQ9NXH8 423 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 USP36Q9P275 1121 aaKnown RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 KLHL8Q9P2G9 620 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 TRHDEQ9UKU6 1024 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 BTBD3Q9Y2F9 522 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
SS18-210ENST00000578700 MAST4O15021 2626 aa10.31□□□□□ -0.76
SS18-210ENST00000578700 MGAQ8IWI9 3026 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 A0A087WUV0 522 aaPredicted RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 H3BQF6 201 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 GOLGA8MH3BSY2 632 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 DFFAO00273 331 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 FLRT2O43155 660 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ACSL3O95573 720 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 SYF2O95926 243 aaKnown RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 APRTP07741 180 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 RHOQP17081 205 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 OXTRP30559 389 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 CHKAP35790 457 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 IL9RQ01113 521 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 PPIDQ08752 370 aaKnown RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 ZNF844Q08AG5 666 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 C19orf57Q0VDD7 668 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 SLC10A2Q12908 348 aaPredicted RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 STAT4Q14765 748 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 UAP1Q16222 522 aaPredicted RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 KYNUQ16719 465 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 GEN1Q17RS7 908 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 PARP6Q2NL67 630 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 RABGAP1LQ5R372 815 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ANKRD20A2Q5SQ80 823 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ANKRD20A1Q5TYW2 823 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ANKRD20A3Q5VUR7 823 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 DHRS13Q6UX07 377 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 B4GALNT4Q76KP1 1039 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 CHSY1Q86X52 802 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 PALM2Q8IXS6 379 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 CCDC13Q8IYE1 715 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ZBED8Q8IZ13 594 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ATPAF2Q8N5M1 289 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 NAT8LQ8N9F0 302 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 ATP11CQ8NB49 1132 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 CCDC110Q8TBZ0 833 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 NSMCE1Q8WV22 266 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 UCMAQ8WVF2 138 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 SORCS1Q8WY21 1168 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 P2RY11Q96G91 374 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 LGMNQ99538 433 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 CIPCQ9C0C6 399 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 VPS37BQ9H9H4 285 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 PPCSQ9HAB8 311 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 XAB2Q9HCS7 855 aaKnown RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 ANLNQ9NQW6 1124 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 MARK1Q9P0L2 795 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 THAP10Q9P2Z0 257 aaPredicted RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 PPARGC1AQ9UBK2 798 aaKnown RBP10.3□□□□□ -0.76
SS18-210ENST00000578700 SNX11Q9Y5W9 270 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 HS3ST4Q9Y661 456 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 TMEM131Q92545 1883 aa10.3□□□□□ -0.76
SS18-210ENST00000578700 TP53BP1Q12888 1972 aaPredicted RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 TLDC2A0PJX2 215 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms