RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 FAM72CH0Y354 149 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 KDELR3O43731 214 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 NUDT21O43809 227 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 FGFR1OPO95684 399 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 TNFP01375 233 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 PNMA6AP0CW24 399 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 GP1BBP13224 206 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 ADRA1BP35368 520 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 ARSDP51689 593 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 MAPK10P53779 464 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 B4GALNT1Q00973 533 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 RAD51Q06609 339 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 PAK1Q13153 545 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 HLTFQ14527 1009 aaKnown RBP eCLIP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 C16orf72Q14CZ0 275 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 RAB6CQ53S08 254 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 INO80DQ53TQ3 878 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 FAM72AQ5TYM5 149 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 FAM72DQ6L9T8 149 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 FAM72BQ86X60 149 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 IRF2BP1Q8IU81 584 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 SFTPA2Q8IWL1 248 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 ZNF564Q8TBZ8 553 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 HCAR2Q8TDS4 363 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 WDR92Q96MX6 357 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 MAGEB5Q9BZ81 275 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 RAB6CQ9H0N0 254 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 SEMA6CQ9H3T2 930 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 LRIT1Q9P2V4 623 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 OR1A2Q9Y585 309 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 CHD5Q8TDI0 1954 aa10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-227ENST00000575560 TMEM202A6NGA9 273 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 ZSCAN5CA6NGD5 496 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 AGRPO00253 132 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 B4GAT1O43505 415 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 TMCC1O94876 653 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 CCL4P13236 92 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 CR2P20023 1033 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 LIG3P49916 1009 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 BPIFB4P59827 614 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 FOXK1P85037 733 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 ELP6Q0PNE2 266 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 UGP2Q16851 508 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 C14orf28Q4W4Y0 310 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 C2CD6Q53TS8 623 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 TMEM164Q5U3C3 297 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 RWDD4Q6NW29 188 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 DPY19L2P1Q6NXN4 242 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 BORAQ6PGQ7 559 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 PTRH1Q86Y79 214 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 FAM46DQ8NEK8 389 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 ATL2Q8NHH9 583 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 NKD1Q969G9 470 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 PDXPQ96GD0 296 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 GDAP1L1Q96MZ0 367 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 EPN3Q9H201 632 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 KLQ9UEF7 1012 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 TUBD1Q9UJT1 453 aa10.05□□□□□ -0.8
CALCOCO2-227ENST00000575560 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 TSPAN11A1L157 253 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 STMND1H3BQB6 276 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 BIN1O00499 593 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 TNFRSF10CO14798 259 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 INSIG1O15503 277 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 BUB1O43683 1085 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 RAMP2O60895 175 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 LRIG2O94898 1065 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 CPNE6O95741 557 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 IGSF6O95976 241 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 HOXC4P09017 264 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 FGF3P11487 239 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 CYP11B1P15538 503 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 POLE2P56282 527 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 ATP11AP98196 1134 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 KCNAB2Q13303 367 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 MTM1Q13496 603 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 ARHGEF7Q14155 803 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 IGFBP7Q16270 282 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 SKIDA1Q1XH10 827 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 EFHC2Q5JST6 749 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 PHF19Q5T6S3 580 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 ZNF438Q7Z4V0 828 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 TAF8Q7Z7C8 310 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 PIM3Q86V86 326 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 C17orf82Q86X59 251 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 NETO2Q8NC67 525 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 PLA2G15Q8NCC3 412 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 OR56A4Q8NGH8 313 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 JPH3Q8WXH2 748 aaPredicted RBP10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 OR1E3Q8WZA6 343 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 FUBP1Q96AE4 644 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 HMCESQ96FZ2 354 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 KLC2Q9H0B6 622 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 TMEM168Q9H0V1 697 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 CDH19Q9H159 772 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 NOL6Q9H6R4 1146 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms