RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZNF846Q147U1 533 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 TMTC4Q5T4D3 741 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 IL31Q6EBC2 164 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 JADE1Q6IE81 842 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 TBPL2Q6SJ96 375 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 ZC3HC1Q86WB0 502 aaKnown RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 GABPB2Q8TAK5 448 aaPredicted RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 ZNF641Q96N77 438 aaPredicted RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 PSD2Q9BQI7 771 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 LPIN3Q9BQK8 851 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 GPN2Q9H9Y4 310 aaPredicted RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 SCHIP1Q9P0W5 487 aaPredicted RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 KLQ9UEF7 1012 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 SCN4AP35499 1836 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 SYNJ2BP-COX16A0A087WUM0 186 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 LACTBL1A8MY62 500 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 FAM47E-STBD1D6RA91 191 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 INPP4BO15327 924 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 XYLBO75191 536 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 GMNNO75496 209 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 PGK1P00558 417 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 TSPAN8P19075 237 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 PAX3P23760 479 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 ARL4AP40617 200 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 PLK1P53350 603 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 FKBP1AP62942 108 aaKnown RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 OCA2Q04671 838 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 SELENBP1Q13228 472 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 CYP51A1Q16850 503 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 TIGD2Q4W5G0 525 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 OTUD3Q5T2D3 398 aaPredicted RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 IFNEQ86WN2 208 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 FUNDC1Q8IVP5 155 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 ADGRG5Q8IZF4 528 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 PDPRQ8NCN5 879 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 ZUFSPQ96AP4 578 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 CNDP2Q96KP4 475 aaKnown RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 CGREF1Q99674 301 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 MCMBPQ9BTE3 642 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 DGCR6LQ9BY27 220 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 ADNPQ9H2P0 1102 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 RPF1Q9H9Y2 349 aaKnown RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 UBP1Q9NZI7 540 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 COX16Q9P0S2 106 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 ZNF70Q9UC06 446 aaPredicted RBP14.5□□□□□ -0.09
SMG6-215ENST00000574501 ACOT9Q9Y305 439 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 RAD54BQ9Y620 910 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 USP3Q9Y6I4 520 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 A6NL46 340 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 NR5A2O00482 541 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 AHSGP02765 367 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 CHRM3P20309 590 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 TKTP29401 623 aaKnown RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 NKX2-5P52952 324 aaPredicted RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 GJA9P57773 515 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 PIGFQ07326 219 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 CLEC6AQ6EIG7 209 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 ZNF280DQ6N043 979 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 RNF135Q8IUD6 432 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 NSUN6Q8TEA1 469 aaKnown RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 ZFP90Q8TF47 636 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 PTCD2Q8WV60 388 aaKnown RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 STON2Q8WXE9 905 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 HPDLQ96IR7 371 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 SLC45A3Q96JT2 553 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 MYRFLQ96LU7 910 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 VTA1Q9NP79 307 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 ERVK-11Q9UQG0 969 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 MTF2Q9Y483 593 aaPredicted RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 CNTNAP1P78357 1384 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 AQP12BA6NM10 295 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 ZNF487B1APH4 448 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 BCAS1O75363 584 aaPredicted RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 ASNSP08243 561 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 NCK1P16333 377 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 AXLP30530 894 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 SHMT2P34897 504 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 CSRP3P50461 194 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 EFNA5P52803 228 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 POU5F1BQ06416 359 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 LAMTOR4Q0VGL1 99 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 CTBP1Q13363 440 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 MAPK11Q15759 364 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 SOWAHAQ2M3V2 549 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 VPS26BQ4G0F5 336 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 AGAP7PQ5VUJ5 663 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 IRAK1BP1Q5VVH5 260 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 BROXQ5VW32 411 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 GTF2IRD2BQ6EKJ0 949 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 CRTC3Q6UUV7 619 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 MPZL3Q6UWV2 235 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 GTF2IRD2Q86UP8 949 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 PSTKQ8IV42 348 aaKnown RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 DENND6AQ8IWF6 608 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 AQP12AQ8IXF9 295 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 EFHD2Q96C19 240 aaPredicted RBP14.49□□□□□ -0.09
SMG6-215ENST00000574501 ATG4CQ96DT6 458 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 NRBF2Q96F24 287 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 DHRS1Q96LJ7 313 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms