RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CFAP58Q5T655 872 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 PALM2Q8IXS6 379 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 IL17RCQ8NAC3 791 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 UHMK1Q8TAS1 419 aaKnown RBP24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 BLOC1S5Q8TDH9 187 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 PIH1D2Q8WWB5 315 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 OR8D1Q8WZ84 308 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 ECHDC3Q96DC8 303 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 CCDC78A2IDD5 438 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 ANKRD66B4E2M5 251 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 MAN2B1O00754 1011 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 RNF40O75150 1001 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 CTPS1P17812 591 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 SSTR1P30872 391 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 CCINQ13939 588 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 ZNF852Q6ZMS4 543 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 TTC25Q96NG3 672 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 FAM129BQ96TA1 746 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 VIPAS39Q9H9C1 493 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 PLAC1Q9HBJ0 212 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 CHRAC1Q9NRG0 131 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 FBXL21Q9UKT6 434 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 SARDHQ9UL12 918 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 SPO11Q9Y5K1 396 aa24.19■■□□□ 1.46
ATPAF1-213ENST00000574428 KLF8O95600 359 aaPredicted RBP24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 ALADP13716 330 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 NTSR1P30989 418 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 GRIA4P48058 902 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 GPX6P59796 221 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 CES3Q6UWW8 571 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 KCNV2Q8TDN2 545 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 OSBPL1AQ9BXW6 950 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 VPS37BQ9H9H4 285 aa24.18■■□□□ 1.46
ATPAF1-213ENST00000574428 KRBA1A5PL33 1030 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 ALPIP09923 528 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 PGAM1P18669 254 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 RPL26P61254 145 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 SLC29A2Q14542 456 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 PCID2Q5JVF3 399 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 UNC5AQ6ZN44 842 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 TXNDC5Q8NBS9 432 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 PPHLN1Q8NEY8 458 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 LRIG1Q96JA1 1093 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 SOX13Q9UN79 622 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 RPL26L1Q9UNX3 145 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 TCAF1Q9Y4C2 921 aa24.17■■□□□ 1.46
ATPAF1-213ENST00000574428 ADAM23O75077 832 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 PRNPP04156 253 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 ABL2P42684 1182 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 PRKCQQ04759 706 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 SDE2Q6IQ49 451 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 ZBTB9Q96C00 473 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 ZNF778Q96MU6 729 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 WNT16Q9UBV4 365 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 PPM1HQ9ULR3 514 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 KPNA3O00505 521 aaPredicted RBP24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 SYNCRIPO60506 623 aaKnown RBP24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 METAP1P53582 386 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 MRPS21P82921 87 aaKnown RBP24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 CAMK2GQ13555 558 aaPredicted RBP24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 ZNF805Q5CZA5 627 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 LRRC73Q5JTD7 316 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 C3orf62Q6ZUJ4 267 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 RPLP0P6Q8NHW5 317 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 PIP4K2CQ8TBX8 421 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 GABRG3Q99928 467 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 NAT9Q9BTE0 207 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 KIFC1Q9BW19 673 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 RPS6KL1Q9Y6S9 549 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 ATG2BQ96BY7 2078 aa24.16■■□□□ 1.46
ATPAF1-213ENST00000574428 A0A0J9YYE9 177 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 A0A0U1RQS6 177 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 IL1BP01584 269 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 TRBC1P01850 177 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 ADRA1DP25100 572 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 FBXO43Q4G163 708 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 SPDYCQ5MJ68 293 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 KIAA1211LQ6NV74 962 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 PKN3Q6P5Z2 889 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 TRMT11Q7Z4G4 463 aaKnown RBP24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 MMAAQ8IVH4 418 aaKnown RBP24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 TMIEQ8NEW7 156 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 ZNF669Q96BR6 464 aaPredicted RBP24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 MFSD3Q96ES6 412 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 FCRL3Q96P31 734 aaPredicted RBP24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 CD320Q9NPF0 282 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 MUTYHQ9UIF7 546 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 ARL5AQ9Y689 179 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 TRIOO75962 3097 aa24.15■■□□□ 1.46
ATPAF1-213ENST00000574428 MAGEB16A2A368 324 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 HEATR9A2RTY3 570 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 AURKAO14965 403 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 SLC4A1P02730 911 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 HOXB2P14652 356 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 NMBRP28336 390 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 PSMD8P48556 350 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 CRYMQ14894 314 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 BRAT1Q6PJG6 821 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 DSG4Q86SJ6 1040 aa24.14■■□□□ 1.46
ATPAF1-213ENST00000574428 CACUL1Q86Y37 369 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms