RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 MFSD2AQ8NA29 543 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 DCAF4L2Q8NA75 395 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 MLKLQ8NB16 471 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 TMEM35BQ8NCS4 154 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 TRIM62Q9BVG3 475 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 NUP62CLQ9H1M0 184 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 VPS16Q9H269 839 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 PDCL3Q9H2J4 239 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 NOL6Q9H6R4 1146 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 ZDHHC6Q9H6R6 413 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 FAM207AQ9NSI2 230 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 SLC12A6Q9UHW9 1150 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 RAI2Q9Y5P3 530 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 A0A1W2PNU3 283 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 C1QTNF3-AMACRE9PGA6 284 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 SCAMP1O15126 338 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 NME2P22392 152 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 OR1E1P30953 314 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 NNMTP40261 264 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 EIF2S3P41091 472 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 SERPINH1P50454 418 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 DNA2P51530 1060 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 CCNHP51946 323 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 HDAC4P56524 1084 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 JAM2P57087 298 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 GNA12Q03113 381 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 SETMARQ53H47 684 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 TCP11X2Q5H9J9 407 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 BRMS1LQ5PSV4 323 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 CDKAL1Q5VV42 579 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 CRTC1Q6UUV9 634 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 PTAR1Q7Z6K3 402 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 NLRP14Q86W24 1093 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 HORMAD1Q86X24 394 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 ERICH1Q86X53 443 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 RBFAQ8N0V3 343 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 RXFP2Q8WXD0 754 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 PGAP3Q96FM1 320 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 ATP13A1Q9HD20 1204 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 LMBRD1Q9NUN5 540 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 GPATCH2LQ9NWQ4 482 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 IL36AQ9UHA7 158 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 DNAI1Q9UI46 699 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 STAP1Q9ULZ2 295 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 ATMQ13315 3056 aa9.39□□□□□ -0.91
NPLOC4-210ENST00000572824 KALRNO60229 2985 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 C2CD4BA6NLJ0 364 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 ALOX15BO15296 676 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 INSIG1O15503 277 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 SLC7A4O43246 635 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 BRINP1O60477 761 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 PIAS2O75928 621 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 LRIG2O94898 1065 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 PCDH8O95206 1070 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 PRKCGP05129 697 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 ADRB3P13945 408 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 DGKAP23743 735 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 ARNTP27540 789 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 RXRGP48443 463 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 POLR2FP61218 127 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 OGDHQ02218 1023 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 FZD2Q14332 565 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 STAT4Q14765 748 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 FAM46CQ5VWP2 391 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 ERN2Q76MJ5 926 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 SULF2Q8IWU5 870 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 EXOC2Q96KP1 924 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 BMFQ96LC9 184 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 KLF6Q99612 283 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 HSD3B7Q9H2F3 369 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 PREBQ9HCU5 417 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 IGSF5Q9NSI5 407 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 CHMP5Q9NZZ3 219 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 SIK3Q9Y2K2 1263 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 FADS3Q9Y5Q0 445 aa9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 ARHGEF17Q96PE2 2063 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-210ENST00000572824 SCN8AQ9UQD0 1980 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 IGLON5A6NGN9 336 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 PRAMEF26H0Y7S4 382 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 CCP110O43303 1012 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 C1QL1O75973 258 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 PAK4O96013 591 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 UGT2B4P06133 528 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 KRT10P13645 584 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 JUPP14923 745 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 MMP8P22894 467 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 ERCC5P28715 1186 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 IGFALSP35858 605 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 ARRB1P49407 418 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 POU4F3Q15319 338 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 SYCP1Q15431 976 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 E4F1Q66K89 784 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms