RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 JUNDP17535 347 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 ITIH2P19823 946 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 IL1R2P27930 398 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CSNK1DP48730 415 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 YPEL5P62699 121 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 E2F1Q01094 437 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 IL10RBQ08334 325 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TARDBPQ13148 414 aaKnown RBP eCLIP12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 IRF4Q15306 451 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 UGP2Q16851 508 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TMEM52BQ4KMG9 183 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 BOLA3Q53S33 107 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TPRG1LQ5T0D9 272 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TMCO4Q5TGY1 634 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TMCO3Q6UWJ1 677 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 KDM7AQ6ZMT4 941 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CAMK1DQ8IU85 385 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TSEN2Q8NCE0 465 aaKnown RBP12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 BTN2A2Q8WVV5 523 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 APOLD1Q96LR9 279 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 THAP2Q9H0W7 228 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CAAP1Q9H8G2 361 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 USP29Q9HBJ7 922 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 IFNKQ9P0W0 207 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 SEPT3Q9UH03 358 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 APOBEC3BQ9UH17 382 aaKnown RBP12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 ANAPC7Q9UJX3 599 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CAPN11Q9UMQ6 739 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CLCA2Q9UQC9 943 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 ATP8A1Q9Y2Q0 1164 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 RAXQ9Y2V3 346 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 ITPR1Q14643 2758 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CHD5Q8TDI0 1954 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 LAMA5O15230 3695 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 TOR1BO14657 336 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 BUB1BO60566 1050 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 GYPCP04921 128 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 GIMD1P0DJR0 217 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 C6P13671 934 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 TCF4P15884 667 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 MMP12P39900 470 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 RGRP47804 291 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 DUSP3P51452 185 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 AP1S1P61966 158 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 BCL2L1Q07817 233 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZNF235Q14590 738 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 LRRC14Q15048 493 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZSCAN23Q3MJ62 389 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZCCHC8Q6NZY4 707 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 MACC1Q6ZN28 852 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 ARHGAP36Q6ZRI8 547 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 SRLQ86TD4 932 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 PHACTR4Q8IZ21 702 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 NIPA2Q8N8Q9 360 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 FAM181AQ8N9Y4 354 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 RFFLQ8WZ73 363 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 IL12RB2Q99665 862 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 MBNL1Q9NR56 388 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 NCKIPSDQ9NZQ3 722 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 SPASTQ9UBP0 616 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 IP6K2Q9UHH9 426 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 COQ6Q9Y2Z9 468 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 CSNK1G3Q9Y6M4 447 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 ACACAQ13085 2346 aa12.46□□□□□ -0.41
CTDNEP1-205ENST00000570828 A0A087X0T9 212 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 LZTS3O60299 673 aaPredicted RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 PRKCGP05129 697 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 GP1BAP07359 652 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 FAM228BP0C875 321 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 RARAP10276 462 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 HTR1BP28222 390 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 SERPINB6P35237 376 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 EIF4A3P38919 411 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 LIG3P49916 1009 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 SCNN1BP51168 640 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 RENBPP51606 427 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 INSM1Q01101 510 aaPredicted RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 NSUN2Q08J23 767 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 EIF2B5Q13144 721 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 KRT81Q14533 505 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 LBRQ14739 615 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 PRRT3Q5FWE3 981 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 ALKBH5Q6P6C2 394 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 POLNQ7Z5Q5 900 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 RBFAQ8N0V3 343 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 BBS5Q8N3I7 341 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 ATPAF2Q8N5M1 289 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 NSMCE1Q8WV22 266 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 TEKT4Q8WW24 435 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 BTBD6Q96KE9 485 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 ZNF599Q96NL3 588 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 PSKH2Q96QS6 385 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms