RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 AREL1O15033 823 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 TSPAN6O43657 245 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 POP4O95707 220 aaKnown RBP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 LDOC1O95751 146 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 IGSF6O95976 241 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 CDH6P55285 790 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 RHOAP61586 193 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 DPYSL2Q16555 572 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 CCDC157Q569K6 752 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 PPP6R3Q5H9R7 873 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 PROSER1Q86XN7 944 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 ZNF354CQ86Y25 554 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 RCOR2Q8IZ40 523 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 EXD1Q8NHP7 514 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 RAPGEF5Q92565 580 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 BMFQ96LC9 184 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 KLHL32Q96NJ5 620 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 KCTD15Q96SI1 283 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-203ENST00000570676 C1QTNF2Q9BXJ5 285 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 CALN1Q9BXU9 219 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 SLC17A9Q9BYT1 436 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 PCDH18Q9HCL0 1135 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 COL27A1Q8IZC6 1860 aaPredicted RBP15.27■□□□□ 0.04
RAB40B-203ENST00000570676 WDFY3Q8IZQ1 3526 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 POM121BA6NF01 834 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 EEF2KO00418 725 aaKnown RBP15.27■□□□□ 0.04
RAB40B-203ENST00000570676 RFPL3O75679 317 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 PYGMP11217 842 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 KDELR1P24390 212 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 CXCR5P32302 372 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 ARSEP51690 589 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
RAB40B-203ENST00000570676 CAMK2BQ13554 666 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 PDK2Q15119 407 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 CYTH1Q15438 398 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 LRRC73Q5JTD7 316 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 AFMIDQ63HM1 303 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 GDPD4Q6W3E5 623 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 KDM7AQ6ZMT4 941 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 PTAR1Q7Z6K3 402 aaPredicted RBP15.27■□□□□ 0.04
RAB40B-203ENST00000570676 CCDC50Q8IVM0 306 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 MAP7D3Q8IWC1 876 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 GALNT15Q8N3T1 639 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 SLC25A45Q8N413 288 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 KIF18AQ8NI77 898 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 FAM174AQ8TBP5 190 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 RBM41Q96IZ5 413 aaKnown RBP15.27■□□□□ 0.04
RAB40B-203ENST00000570676 CELF6Q96J87 481 aaKnown RBP15.27■□□□□ 0.04
RAB40B-203ENST00000570676 FEM1CQ96JP0 617 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 EXOC2Q96KP1 924 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 OSBPL9Q96SU4 736 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 CARD9Q9H257 536 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 UCKL1Q9NWZ5 548 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 MFHAS1Q9Y4C4 1052 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 HS3ST3A1Q9Y663 406 aa15.27■□□□□ 0.04
RAB40B-203ENST00000570676 TSPAN11A1L157 253 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 FAM149AA5PLN7 773 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 IGLON5A6NGN9 336 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 H3BRJ5 948 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 TRIM38O00635 465 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 INSIG1O15503 277 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 PRAMEF11O60813 436 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 PIAS2O75928 621 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 PAK4O96013 591 aaPredicted RBP15.26■□□□□ 0.03
RAB40B-203ENST00000570676 CD48P09326 243 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 GIMD1P0DJR0 217 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 TCP1P17987 556 aaKnown RBP15.26■□□□□ 0.03
RAB40B-203ENST00000570676 CETN2P41208 172 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 NDST2P52849 883 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 CLDN6P56747 220 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 DNTTIP2Q5QJE6 756 aaKnown RBP15.26■□□□□ 0.03
RAB40B-203ENST00000570676 TPRG1LQ5T0D9 272 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 SEL1L2Q5TEA6 688 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 SPOCD1Q6ZMY3 1216 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 Q6ZSR6 202 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 RFX8Q6ZV50 586 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 ARHGAP12Q8IWW6 846 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 NPWQ8N729 165 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 DENND6BQ8NEG7 585 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 MDM1Q8TC05 714 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 FAM71BQ8TC56 605 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 ASB12Q8WXK4 309 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 PBKQ96KB5 322 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
RAB40B-203ENST00000570676 SLC39A8Q9C0K1 460 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 DKK3Q9UBP4 350 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 UBA2Q9UBT2 640 aaPredicted RBP15.26■□□□□ 0.03
RAB40B-203ENST00000570676 SAR1BQ9Y6B6 198 aa15.26■□□□□ 0.03
RAB40B-203ENST00000570676 GOLGA4Q13439 2230 aaKnown RBP15.25■□□□□ 0.03
RAB40B-203ENST00000570676 C3orf70A6NLC5 250 aaPredicted RBP15.25■□□□□ 0.03
RAB40B-203ENST00000570676 J3KR12 359 aa15.25■□□□□ 0.03
RAB40B-203ENST00000570676 SIGLEC6O43699 453 aa15.25■□□□□ 0.03
RAB40B-203ENST00000570676 CEP104O60308 925 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms