RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CD38P28907 300 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 PTPN7P35236 360 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 NUDT1P36639 197 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 GRIA4P48058 902 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 SUOXP51687 545 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 CLDN2P57739 230 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 CCDC173Q0VFZ6 552 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 NOMO1Q15155 1222 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 PCSK7Q16549 785 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 MEI1Q5TIA1 1274 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
CDT1-203ENST00000569140 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 PTAR1Q7Z6K3 402 aaPredicted RBP12.9□□□□□ -0.34
CDT1-203ENST00000569140 CDKL3Q8IVW4 592 aaPredicted RBP12.9□□□□□ -0.34
CDT1-203ENST00000569140 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 MINDY1Q8N5J2 469 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 LPCAT1Q8NF37 534 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 NETO1Q8TDF5 533 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 HCAR2Q8TDS4 363 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 VOPP1Q96AW1 172 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 PDLIM2Q96JY6 352 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 NSMCE3Q96MG7 304 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 QKIQ96PU8 341 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDT1-203ENST00000569140 RBM15Q96T37 977 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDT1-203ENST00000569140 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 CHKBQ9Y259 395 aa12.9□□□□□ -0.34
CDT1-203ENST00000569140 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.35
CDT1-203ENST00000569140 A0A1W2PQ67 120 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 HACD1B0YJ81 288 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 TRAFD1O14545 582 aaPredicted RBP12.89□□□□□ -0.35
CDT1-203ENST00000569140 KCNK3O14649 394 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
CDT1-203ENST00000569140 AREL1O15033 823 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 MTSS1O43312 755 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 OPHN1O60890 802 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
CDT1-203ENST00000569140 PGLSO95336 258 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 CER1O95813 267 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ELFN1P0C7U0 828 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 C6P13671 934 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 CES1P23141 567 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 PTPN3P26045 913 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 RBL1P28749 1068 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 MMP12P39900 470 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 TNNT3P45378 269 aaPredicted RBP12.89□□□□□ -0.35
CDT1-203ENST00000569140 LIG3P49916 1009 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 FGL2Q14314 439 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 USP45Q70EL2 814 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 KDELC2Q7Z4H8 507 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 CNTD1Q8N815 330 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 C1orf216Q8TAB5 229 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 HTR3CQ8WXA8 447 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ECHDC3Q96DC8 303 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 C1QTNF7Q9BXJ2 289 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ZDHHC5Q9C0B5 715 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 B4GALT6Q9UBX8 382 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 PHTF1Q9UMS5 762 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 EFR3BQ9Y2G0 817 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ANKRD6Q9Y2G4 727 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 SNX11Q9Y5W9 270 aa12.89□□□□□ -0.35
CDT1-203ENST00000569140 ZFHX2Q9C0A1 2572 aaPredicted RBP12.89□□□□□ -0.35
CDT1-203ENST00000569140 H0Y8X5 98 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 FPGTO14772 594 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 VILLO15195 856 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 KCNN4O15554 427 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 HTRA2O43464 458 aaPredicted RBP12.88□□□□□ -0.35
CDT1-203ENST00000569140 SLC4A1P02730 911 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 WNT1P04628 370 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 ALPIP09923 528 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 THEGLP0DJG4 465 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 RBP3P10745 1247 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 CYP2A6P11509 494 aaPredicted RBP12.88□□□□□ -0.35
CDT1-203ENST00000569140 NFKB1P19838 968 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 IL9RQ01113 521 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 XRCC4Q13426 336 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 ACOX1Q15067 660 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 TMEM52BQ4KMG9 183 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 TEX44Q53QW1 395 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 IL27RAQ6UWB1 636 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 DPPA4Q7L190 304 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 KLHDC7BQ96G42 594 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 TDRD1Q9BXT4 1180 aaKnown RBP12.88□□□□□ -0.35
CDT1-203ENST00000569140 GLOD4Q9HC38 313 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 PCDH9Q9HC56 1237 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms