RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FAM174AQ8TBP5 190 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 ECHDC3Q96DC8 303 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 CNDP2Q96KP4 475 aaKnown RBP25.37■■□□□ 1.65
FANCA-228ENST00000567943 RNF157Q96PX1 679 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 PCDH12Q9NPG4 1184 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 TTC24A2A3L6 582 aaPredicted RBP25.36■■□□□ 1.65
FANCA-228ENST00000567943 TRIM38O00635 465 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 IPO7O95373 1038 aaKnown RBP25.36■■□□□ 1.65
FANCA-228ENST00000567943 KRT1P04264 644 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 PRKCGP05129 697 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 GIMD1P0DJR0 217 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 DGKAP23743 735 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 SERPINA4P29622 427 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 GARSP41250 739 aaKnown RBP25.36■■□□□ 1.65
FANCA-228ENST00000567943 PFN3P60673 137 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 SEMG2Q02383 582 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 GALNT2Q10471 571 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 ST3GAL2Q16842 350 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 ZNF542PQ5EBM4 170 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 RAD9BQ6WBX8 426 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 LRRC49Q8IUZ0 686 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 BBS5Q8N3I7 341 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 DENND6BQ8NEG7 585 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 GOLPH3Q9H4A6 298 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 MBNL1Q9NR56 388 aaKnown RBP25.36■■□□□ 1.65
FANCA-228ENST00000567943 KLF15Q9UIH9 416 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 CELSR3Q9NYQ7 3312 aa25.36■■□□□ 1.65
FANCA-228ENST00000567943 SPTY2D1-AS1A0A0U1RR47 76 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 TRAFD1O14545 582 aaPredicted RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 ENC1O14682 589 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 RIOK3O14730 519 aaKnown RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 FPGTO14772 594 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 LDOC1O95751 146 aaPredicted RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 CR2P20023 1033 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 IGFALSP35858 605 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 HSPA9P38646 679 aaKnown RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 RABIFP47224 123 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 SUOXP51687 545 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 AP1S1P61966 158 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 GBE1Q04446 702 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 BCL2L1Q07817 233 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 MARC1Q5VT66 337 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 BRAT1Q6PJG6 821 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 CCNI2Q6ZMN8 369 aaPredicted RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 MARCH9Q86YJ5 346 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 TP53I13Q8NBR0 393 aaPredicted RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 BAG1Q99933 345 aaPredicted RBP25.35■■□□□ 1.65
FANCA-228ENST00000567943 IMPACTQ9P2X3 320 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 COQ6Q9Y2Z9 468 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 ALG6Q9Y672 507 aa25.35■■□□□ 1.65
FANCA-228ENST00000567943 A0A0A6YYK5 440 aaPredicted RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 C3orf70A6NLC5 250 aaPredicted RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 PIAS2O75928 621 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 TM7SF2O76062 418 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 MMP12P39900 470 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 MMP13P45452 471 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 ODF2Q5BJF6 829 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 TMPRSS7Q7RTY8 843 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 DCP2Q8IU60 420 aaKnown RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 PAF1Q8N7H5 531 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 KDF1Q8NAX2 398 aaPredicted RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 CXorf40AQ8TE69 158 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 RNF25Q96BH1 459 aaPredicted RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 IFT43Q96FT9 208 aa25.34■■□□□ 1.65
FANCA-228ENST00000567943 DDX56Q9NY93 547 aaKnown RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 PNMA8BQ9ULN7 279 aaPredicted RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 REXO2Q9Y3B8 237 aaKnown RBP25.34■■□□□ 1.65
FANCA-228ENST00000567943 KNTC1P50748 2209 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 RCCD1A6NED2 376 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 ZNF487B1APH4 448 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 CAPNS1P04632 268 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 ACADVLP49748 655 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 MAXP61244 160 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 ELP6Q0PNE2 266 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 SLC10A2Q12908 348 aaPredicted RBP25.33■■□□□ 1.65
FANCA-228ENST00000567943 IFI16Q16666 785 aaKnown RBP25.33■■□□□ 1.65
FANCA-228ENST00000567943 CCDC157Q569K6 752 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.33■■□□□ 1.65
FANCA-228ENST00000567943 NUDCD1Q96RS6 583 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 MGME1Q9BQP7 344 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 MAK16Q9BXY0 300 aaKnown RBP25.33■■□□□ 1.65
FANCA-228ENST00000567943 SCUBE2Q9NQ36 999 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 ATP8A1Q9Y2Q0 1164 aa25.33■■□□□ 1.65
FANCA-228ENST00000567943 SIGLEC6O43699 453 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 C6P13671 934 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 MX2P20592 715 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 RALGDSQ12967 914 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 PDE1CQ14123 709 aaPredicted RBP25.32■■□□□ 1.64
FANCA-228ENST00000567943 PROX2Q3B8N5 592 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 TIGD7Q6NT04 549 aaPredicted RBP25.32■■□□□ 1.64
FANCA-228ENST00000567943 ERAP2Q6P179 960 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 DHRS13Q6UX07 377 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 VSIG1Q86XK7 387 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 PLD5Q8N7P1 536 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 ACRBPQ8NEB7 543 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 LRRN4Q8WUT4 740 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 NT5MQ9NPB1 228 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 DNAJC28Q9NX36 388 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 DTLQ9NZJ0 730 aa25.32■■□□□ 1.64
FANCA-228ENST00000567943 SALL4Q9UJQ4 1053 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms