RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 NAGLUP54802 743 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 TNK2Q07912 1038 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 EFEMP1Q12805 493 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 POU6F1Q14863 301 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 TRIP4Q15650 581 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 LSM12Q3MHD2 195 aaKnown RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 ACBD5Q5T8D3 534 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 ARHGAP36Q6ZRI8 547 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 C14orf80Q86SX3 495 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 PDSS2Q86YH6 399 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 SLC41A1Q8IVJ1 513 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 ZNF683Q8IZ20 524 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 TOP1MTQ969P6 601 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 ZNF689Q96CS4 500 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 TSPAN17Q96FV3 270 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 MAELQ96JY0 434 aaKnown RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 CEP295NLQ96MC4 621 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 TTLL2Q9BWV7 592 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 KLHL4Q9C0H6 718 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 SLC25A51Q9H1U9 297 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 RC3H2Q9HBD1 1191 aaKnown RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 CYP4F11Q9HBI6 524 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 RBM22Q9NW64 420 aaKnown RBP eCLIP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 HACD3Q9P035 362 aa17.86■□□□□ 0.45
CMTM3-214ENST00000567572 C6orf203Q9P0P8 240 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-214ENST00000567572 ABHD14A-ACY1A0A1B0GW23 586 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 DLX3O60479 287 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 MT-CYBP00156 380 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-214ENST00000567572 HLA-DQB2P05538 268 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 ATP5F1P24539 256 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-214ENST00000567572 SLC26A3P40879 764 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 SLC1A2P43004 574 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 TUBP50607 506 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 SLC12A2P55011 1212 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 CYLC2Q14093 348 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-214ENST00000567572 ESRP1Q6NXG1 681 aaKnown RBP17.85■□□□□ 0.45
CMTM3-214ENST00000567572 UMODL1-AS1Q8N2C9 162 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 ATP13A1Q9HD20 1204 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 MAN1C1Q9NR34 630 aa17.85■□□□□ 0.45
CMTM3-214ENST00000567572 LOC100653049A0A140TA62 436 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 SLC38A8A6NNN8 435 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 GOLGA8TH3BQL2 631 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 KRT34O76011 436 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PDE5AO76074 875 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 TBX18O95935 607 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PIM1P11309 404 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 RPL17P18621 184 aaKnown RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 GJA8P48165 433 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 RENBPP51606 427 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 GALNT1Q10472 559 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 SLC14A2Q15849 920 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 FAM83EQ2M2I3 478 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 ZFP1Q6P2D0 407 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 BNC2Q6ZN30 1099 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PGAM4Q8N0Y7 254 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 LSMEM2Q8N112 164 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PIP4K2CQ8TBX8 421 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 ARMC5Q96C12 935 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 ZNF419Q96HQ0 510 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 MRGPRX2Q96LB1 330 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 BTBD9Q96Q07 612 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 MARCH2Q9P0N8 246 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 FBXO5Q9UKT4 447 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 MAGED2Q9UNF1 606 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 NUP205Q92621 2012 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 SHROOM3Q8TF72 1996 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 HSPA1AP0DMV8 641 aaKnown RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 HSPA1BP0DMV9 641 aaKnown RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 OR1D2P34982 312 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 CLCN2P51788 898 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 MPP1Q00013 466 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 LRRC26Q2I0M4 334 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 C10orf120Q5SQS8 335 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 ZNF470Q6ECI4 717 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 NEPROQ6NW34 567 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 KDELC1Q6UW63 502 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 SDCCAG8Q86SQ7 713 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 SNX32Q86XE0 403 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 HPS6Q86YV9 775 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 DENND6AQ8IWF6 608 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 GIPC2Q8TF65 315 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PYDC1Q8WXC3 89 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 DLG3Q92796 817 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 ELMO2Q96JJ3 720 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 ZBTB26Q9HCK0 441 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PRDM5Q9NQX1 630 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 NDFIP2Q9NV92 336 aa17.84■□□□□ 0.45
CMTM3-214ENST00000567572 IPO11Q9UI26 975 aaKnown RBP17.84■□□□□ 0.45
CMTM3-214ENST00000567572 PENKP01210 267 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 LYNP07948 512 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 RHOQP17081 205 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 ITGB8P26012 769 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 LEPRP48357 1165 aaKnown RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 NUDT2P50583 147 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 IRX1P78414 480 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 CNGA3Q16281 694 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 MS4A13Q5J8X5 152 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 AGAP9Q5VTM2 703 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 FBXO46Q6PJ61 603 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms