RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 KCTD11Q693B1 232 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 KDELC1Q6UW63 502 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 RANBP10Q6VN20 620 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 KBTBD6Q86V97 674 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 GRK7Q8WTQ7 553 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 PIH1D2Q8WWB5 315 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 ERLEC1Q96DZ1 483 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 PPP1R2P1Q96PQ5 205 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 RBM15Q96T37 977 aaKnown RBP eCLIP12.72□□□□□ -0.379e-7■■■■□ 21.1
SF3B3-206ENST00000565990 MLPHQ9BV36 600 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 PAK5Q9P286 719 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 FAM153AQ9UHL3 310 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 FZD4Q9ULV1 537 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 NFU1Q9UMS0 254 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 RAI2Q9Y5P3 530 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 C16orf96A6NNT2 1141 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 MID1O15344 667 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 SLC7A4O43246 635 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF217O75362 1048 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ANXA9O76027 345 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PGLSO95336 258 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PIGNO95427 931 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 MT-CYBP00156 380 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 IFNB1P01574 187 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 KRT14P02533 472 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 DNTTP04053 509 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 UGT2B4P06133 528 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PDHA1P08559 390 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TIMP2P16035 220 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ADRA1AP35348 466 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 RPL26P61254 145 aaKnown RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 DMWDQ09019 674 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TRAF2Q12933 501 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 MPP3Q13368 585 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 UGP2Q16851 508 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PIP5KL1Q5T9C9 394 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ANO7Q6IWH7 933 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TSSK4Q6SA08 328 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ARHGEF18Q6ZSZ5 1173 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 SYDE1Q6ZW31 735 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 GSTA5Q7RTV2 222 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PRUNE1Q86TP1 453 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 LONP2Q86WA8 852 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ZSWIM9Q86XI8 627 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 CCDC89Q8N998 374 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 GRIN3AQ8TCU5 1115 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 MRGPRX2Q96LB1 330 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TRIB3Q96RU7 358 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TDRD1Q9BXT4 1180 aaKnown RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 NEUROG2Q9H2A3 272 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 TMBIM4Q9HC24 238 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PCDH9Q9HC56 1237 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 PHTF1Q9UMS5 762 aa12.71□□□□□ -0.37
SF3B3-206ENST00000565990 RPL26L1Q9UNX3 145 aaKnown RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 UTP11Q9Y3A2 253 aaKnown RBP12.71□□□□□ -0.37
SF3B3-206ENST00000565990 DOCK9Q9BZ29 2069 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 A0A1W2PP55 124 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 ERI2A8K979 691 aaKnown RBP12.7□□□□□ -0.38
SF3B3-206ENST00000565990 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 KPNA3O00505 521 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-206ENST00000565990 AXIN1O15169 862 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 PSMD3O43242 534 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 ECEL1O95672 775 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 SP9P0CG40 484 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 NR1D1P20393 614 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 IVDP26440 423 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 PSMB4P28070 264 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 OXTRP30559 389 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 FDFT1P37268 417 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 P2RY2P41231 377 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 MAGEA6P43360 314 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 PSMD8P48556 350 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 GEMP55040 296 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 WNT3AP56704 352 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 TAS2R38P59533 333 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 GNGT1P63211 74 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 DR1Q01658 176 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 CDK18Q07002 472 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 CNTN1Q12860 1018 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 MSLNQ13421 630 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-206ENST00000565990 SEMA5AQ13591 1074 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms