RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 WNT9AO14904 365 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 BCAT2O15382 392 aaPredicted RBP20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 CEP104O60308 925 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 PRLP01236 227 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 RPS21P63220 83 aaKnown RBP20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 IRX4P78413 519 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 SIX1Q15475 284 aaPredicted RBP20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 ARMC12Q5T9G4 340 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 TCEAL6Q6IPX3 200 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 KIAA1161Q6NSJ0 714 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 PAF1Q8N7H5 531 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 SPATA22Q8NHS9 363 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 CEP76Q8TAP6 659 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 ATG4AQ8WYN0 398 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 TCEAL3Q969E4 200 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 TADA1Q96BN2 335 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 TM9SF3Q9HD45 589 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 KCND1Q9NSA2 647 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 TRHDEQ9UKU6 1024 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 DNPEPQ9ULA0 475 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 PHTF1Q9UMS5 762 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 CHKBQ9Y259 395 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 A0A1B0GTW7 788 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC31A1O15431 190 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 KCNN4O15554 427 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 MMP20O60882 483 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 CPP00450 1065 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 GNSP15586 552 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 PRLRP16471 622 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 NFKB1P19838 968 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 FAM193AP78312 1265 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 ELP6Q0PNE2 266 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 PTPRRQ15256 657 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 TRIM61Q5EBN2 209 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC23A3Q6PIS1 610 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 WRAP53Q9BUR4 548 aaKnown RBP20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 C1QTNF2Q9BXJ5 285 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 TDRD1Q9BXT4 1180 aaKnown RBP20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC17A9Q9BYT1 436 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 KLHL8Q9P2G9 620 aaPredicted RBP20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 SUSD2Q9UGT4 822 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 PPIL1Q9Y3C6 166 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 PLXNA2O75051 1894 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 LRRK1Q38SD2 2015 aa20.41■□□□□ 0.86
TSPAN3-207ENST00000559494 KHNYNO15037 678 aaKnown RBP20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 PAK4O96013 591 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 MT-CYBP00156 380 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 FGGP02679 453 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 MSNP26038 577 aaKnown RBP20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 NUDT1P36639 197 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 MMP12P39900 470 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 SETMARQ53H47 684 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 ERAP2Q6P179 960 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 C17orf53Q8N3J3 647 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 C1orf54Q8WWF1 131 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 SERAC1Q96JX3 654 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 PBKQ96KB5 322 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC6A18Q96N87 628 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 SMIM14Q96QK8 99 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 CAPN10Q9HC96 672 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 FSCN3Q9NQT6 498 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC6A14Q9UN76 642 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 DMTF1Q9Y222 760 aa20.4■□□□□ 0.86
TSPAN3-207ENST00000559494 CABIN1Q9Y6J0 2220 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 A8MX80 341 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 LIASO43766 372 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 CFIP05156 583 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 CSNK1EP49674 416 aaKnown RBP20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 GNG11P61952 73 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 RACK1P63244 317 aaKnown RBP20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 RALGDSQ12967 914 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 ANKRD20A2Q5SQ80 823 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 ANKRD20A1Q5TYW2 823 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 ANKRD20A3Q5VUR7 823 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 PRR23CQ6ZRP0 262 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 RABEPKQ7Z6M1 372 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 RASGEF1CQ8N431 466 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 GPR161Q8N6U8 529 aaKnown RBP20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 CXorf40AQ8TE69 158 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 SCRN2Q96FV2 425 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 FCRL5Q96RD9 977 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 WDR24Q96S15 920 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 FERMT1Q9BQL6 677 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 FRMD8P1Q9BZ68 369 aaPredicted RBP20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 PCDH9Q9HC56 1237 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 RXFP3Q9NSD7 469 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 UBP1Q9NZI7 540 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 B4GALT6Q9UBX8 382 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 CA5BQ9Y2D0 317 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 ADAMTS9Q9P2N4 1935 aa20.39■□□□□ 0.85
TSPAN3-207ENST00000559494 A0A1W2PR77 199 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 PRR5-ARHGAP8B1AHC4 643 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 F5H423 210 aaPredicted RBP20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 RAD51BO15315 384 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 WNT1P04628 370 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 CTPS1P17812 591 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 LIG3P49916 1009 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 BNC1Q01954 994 aa20.38■□□□□ 0.85
TSPAN3-207ENST00000559494 SGCGQ13326 291 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms