RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NAP1L3Q99457 506 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 TMEM121Q9BTD3 319 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 C1QTNF1Q9BXJ1 281 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZDHHC6Q9H6R6 413 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF148Q9UQR1 794 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ANKRD36A6QL64 1941 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 CXorf51AA0A1B0GTR3 108 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 F5H423 210 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 KIF2AO00139 706 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 CES2O00748 559 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 LIASO43766 372 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 ALDH1A2O94788 518 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 GSRP00390 522 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 IL1BP01584 269 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 HLA-DQB2P05538 268 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 PTPN3P26045 913 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 CHRNA3P32297 505 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 KCNJ1P48048 391 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 PSMD8P48556 350 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 CCNHP51946 323 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 SNRPNP63162 240 aaKnown RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 IFI35P80217 286 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 RAD51Q06609 339 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF33AQ06730 810 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 BYSLQ13895 437 aaKnown RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 MYLK3Q32MK0 819 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 C20orf204Q6ZNR8 217 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 PID1Q7Z2X4 250 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 SRLQ86TD4 932 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 CREG2Q8IUH2 290 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 C1orf210Q8IVY1 113 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 TEX26Q8N6G2 289 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 PAF1Q8N7H5 531 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 FAM71DQ8N9W8 422 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 SLC35B2Q8TB61 432 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 PSKH2Q96QS6 385 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 FAM129BQ96TA1 746 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 IL12RB2Q99665 862 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 FERMT1Q9BQL6 677 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 HEPHQ9BQS7 1158 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 IER2Q9BTL4 223 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 MKRN2Q9H000 416 aaKnown RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 KLHL8Q9P2G9 620 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 IL36AQ9UHA7 158 aa12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 TTC7AQ9ULT0 858 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P8-201ENST00000558211 BCLAF3A2AJT9 711 aaKnown RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 RNF103O00237 685 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 MTSS1O43312 755 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 LEFTY1O75610 366 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 APBB3O95704 486 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 POP4O95707 220 aaKnown RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 TUBB4AP04350 444 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 CTSLP07711 333 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 GABRG2P18507 467 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 COPAP53621 1224 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 DSC2Q02487 901 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 WASHC5Q12768 1159 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 PCSK7Q16549 785 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 CCNG2Q16589 344 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 KCTD19Q17RG1 926 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 TEX44Q53QW1 395 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF776Q68DI1 518 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF438Q7Z4V0 828 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 TAB3Q8N5C8 712 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 CNTD1Q8N815 330 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 PRELID2Q8N945 189 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 PIP4K2CQ8TBX8 421 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 GANCQ8TET4 914 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 PRCCQ92733 491 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 MAGOHBQ96A72 148 aaKnown RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 SIPA1Q96FS4 1042 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF419Q96HQ0 510 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 SEMA3CQ99985 751 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 FRMD8P1Q9BZ68 369 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 HAUS2Q9NVX0 235 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
HMGB1P8-201ENST00000558211 KMT2EQ8IZD2 1858 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 GOLGA6L10A0A0M3HER8 536 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 K7ESF4 209 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 PDE2AO00408 941 aaPredicted RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 PLK4O00444 970 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 KPNA3O00505 521 aaPredicted RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 MID1O15344 667 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 STK10O94804 968 aaKnown RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 PIGNO95427 931 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 IFNB1P01574 187 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 DNTTP04053 509 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 UGT2B4P06133 528 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 ACADMP11310 421 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 SLC8A1P32418 973 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 METAP1P53582 386 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 RPS14P62263 151 aaKnown RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 PLAURQ03405 335 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms