RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SHBQ15464 509 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 RPE65Q16518 533 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 COL28A1Q2UY09 1125 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 TBC1D25Q3MII6 688 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CXorf66Q5JRM2 361 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 TMEM63BQ5T3F8 832 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 SFMBT2Q5VUG0 894 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 TMEM268Q5VZI3 342 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 GLB1LQ6UWU2 654 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CLEC17AQ6ZS10 378 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 Q6ZWC4 215 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 TAOK1Q7L7X3 1001 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CEP57Q86XR8 500 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 TDRPQ86YL5 185 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 KLBQ86Z14 1044 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 MFN1Q8IWA4 741 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 SFTPA1Q8IWL2 248 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 MCEMP1Q8IX19 187 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 KLHL7Q8IXQ5 586 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 FAM217AQ8IXS0 508 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CCDC13Q8IYE1 715 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 FAM110DQ8TAY7 271 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 TMEM170AQ8WVE7 144 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 N4BP2L2Q92802 583 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 NACC2Q96BF6 587 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 PKNOX2Q96KN3 472 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 FAM84AQ96KN4 292 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 ADAD1Q96M93 576 aaKnown RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 CEP295NLQ96MC4 621 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 C16orf45Q96MC5 204 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 FRG2BQ96QU4 278 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 SEPT5Q99719 369 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 UTP14AQ9BVJ6 771 aaKnown RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 GPR87Q9BY21 358 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 NUF2Q9BZD4 464 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 PLEKHA4Q9H4M7 779 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 GRHL1Q9NZI5 618 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 TBK1Q9UHD2 729 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 IL17BQ9UHF5 180 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CDH7Q9ULB5 785 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 FZD4Q9ULV1 537 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 ICKQ9UPZ9 632 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 DTX4Q9Y2E6 619 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CARD8Q9Y2G2 431 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 KCNK7Q9Y2U2 307 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 IKBKGQ9Y6K9 419 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 RNF103-CHMP3A0A140T963 221 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 A0A1B0GVM2 712 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 LNP1A1A4G5 178 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 GAGE12BA1L429 117 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 GAGE12HA6NDE8 117 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 RNF103O00237 685 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 RFXAPO00287 272 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SLC33A1O00400 549 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 PLOD2O00469 737 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 OGG1O15527 345 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CDKL5O76039 1030 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 TJP3O95049 919 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 DDAH2O95865 285 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HIST1H2ABP04908 130 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 RHOP08100 348 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ADH4P08319 380 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 PCNAP12004 261 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 GJA1P17302 382 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HIST1H2ADP20671 130 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 TACR2P21452 398 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 DRD4P21917 467 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 PTPN3P26045 913 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CYP2C18P33260 490 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 VPS41P49754 854 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CLCN3P51790 818 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 YPEL5P62699 121 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 FAM189BP81408 668 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CFHR3Q02985 330 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CXCL9Q07325 125 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 LMAN2Q12907 356 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 NPRL3Q12980 569 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 GAB1Q13480 694 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 KRT24Q2M2I5 525 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SOWAHCQ53LP3 525 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 ARL13AQ5H913 290 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 SLFN13Q68D06 897 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 DHRS7BQ6IAN0 325 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 ETFRF1Q6IPR1 90 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 KIRREL2Q6UWL6 708 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 GBP6Q6ZN66 633 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HIST3H2AQ7L7L0 130 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 MDGA2Q7Z553 956 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CENPVQ7Z7K6 275 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 DSG4Q86SJ6 1040 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SGMS1Q86VZ5 419 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SCYL3Q8IZE3 742 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 LGI4Q8N135 537 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HDDC3Q8N4P3 179 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HJURPQ8NCD3 748 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 ABHD11Q8NFV4 315 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 MYCBPAPQ8TBZ2 947 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ZFAND2BQ8WV99 257 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SEPT1Q8WYJ6 367 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 LPIN2Q92539 896 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms