RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PAFAH1B3Q15102 231 aaKnown RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 IRF4Q15306 451 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 SMAD1Q15797 465 aaKnown RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 UGP2Q16851 508 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 CCNI2Q6ZMN8 369 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 TMPRSS7Q7RTY8 843 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 PARGQ86W56 976 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 DCP2Q8IU60 420 aaKnown RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 TMTC1Q8IUR5 882 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 ATPAF2Q8N5M1 289 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 KDF1Q8NAX2 398 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 PCDH19Q8TAB3 1148 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 CXorf40AQ8TE69 158 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 MGME1Q9BQP7 344 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF670Q9BS34 389 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 ATP13A3Q9H7F0 1226 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 NHEJ1Q9H9Q4 299 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 KLF15Q9UIH9 416 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 ATP8A1Q9Y2Q0 1164 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 COQ6Q9Y2Z9 468 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 PCDHGA1Q9Y5H4 931 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 LAMA5O15230 3695 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 LY6G6EA0A0G2JKS1 128 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 TMEM8BA6NDV4 472 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 SOWAHDA6NJG2 315 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 HTRA2O43464 458 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 SIGLEC6O43699 453 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 AKR1B10O60218 316 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 TM7SF2O76062 418 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 CSF2P04141 144 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 CYLC1P35663 651 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 HSPA9P38646 679 aaKnown RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 SSR1P43307 286 aaKnown RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 CLDN6P56747 220 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 SEMG2Q02383 582 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 BCL2L1Q07817 233 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 GALNT2Q10471 571 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 TRAF2Q12933 501 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 EIF2B5Q13144 721 aaKnown RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 PDE1CQ14123 709 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF235Q14590 738 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 AGERQ15109 404 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 HADHQ16836 314 aaKnown RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 WSCD2Q2TBF2 565 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 ANKRD20A8PQ5CZ79 823 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF542PQ5EBM4 170 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 DHRS13Q6UX07 377 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 MARCH9Q86YJ5 346 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 PQLC3Q8N755 202 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF548Q8NEK5 533 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-224ENST00000556737 OR4C6Q8NH72 309 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 MAML1Q92585 1016 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 CCDC42Q96M95 316 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 NUDCD1Q96RS6 583 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 DNAJC28Q9NX36 388 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 LCMT1Q9UIC8 334 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 PYCARDQ9ULZ3 195 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 ZKSCAN5Q9Y2L8 839 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 U3KQA8 63 aa10.4□□□□□ -0.74
SHMT2-224ENST00000556737 DMXL2Q8TDJ6 3036 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 TDRD6O60522 2096 aaKnown RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 C3orf70A6NLC5 250 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 TMEM110-MUSTN1A8MSY1 372 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 FFAR2O15552 330 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 SOCS5O75159 536 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 RFPL3O75679 317 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 KRT37O76014 449 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 MAP3K6O95382 1288 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 KRT7P08729 469 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 XPAP23025 273 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 ACP1P24666 158 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 GARSP41250 739 aaKnown RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 LIG3P49916 1009 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 SCNN1BP51168 640 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 RENBPP51606 427 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 MAXP61244 160 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 GBE1Q04446 702 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 ZNF211Q13398 564 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 CAMK2BQ13554 666 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 PDK2Q15119 407 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 ERAP2Q6P179 960 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 MACC1Q6ZN28 852 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 DPPA4Q7L190 304 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 RBFAQ8N0V3 343 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 TEX26Q8N6G2 289 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 SLC35G2Q8TBE7 412 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 ZCCHC14Q8WYQ9 949 aaKnown RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 RFFLQ8WZ73 363 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 RAPGEF5Q92565 580 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 TCEAL2Q9H3H9 227 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-224ENST00000556737 NLGN3Q9NZ94 848 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 ZMIZ1Q9ULJ6 1067 aa10.39□□□□□ -0.75
SHMT2-224ENST00000556737 CELSR3Q9NYQ7 3312 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-224ENST00000556737 CFAP69A5D8W1 941 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 FAM149AA5PLN7 773 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms