RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CD300LGQ6UXG3 332 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 APTXQ7Z2E3 356 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DNAJB7Q7Z6W7 309 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 MFSD6LQ8IWD5 586 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 FAM114A1Q8IWE2 563 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CD302Q8IX05 232 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CCDC170Q8IYT3 715 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DCP1BQ8IZD4 617 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DAW1Q8N136 415 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ATAD1Q8NBU5 361 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 OR8K1Q8NGG5 319 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 OR2W6PQ8NHA6 318 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DEPDC1BQ8WUY9 529 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 POMGNT1Q8WZA1 660 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DHTKD1Q96HY7 919 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SENP8Q96LD8 212 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TSPAN18Q96SJ8 248 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SEPT5Q99719 369 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 NAPGQ99747 312 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 HEPHQ9BQS7 1158 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 MMTAG2Q9BU76 263 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CARD6Q9BX69 1037 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 EDEM3Q9BZQ6 932 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TSGA10Q9BZW7 698 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CCSER1Q9C0I3 900 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 LRRC27Q9C0I9 530 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 THAP9Q9H5L6 903 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 C8orf33Q9H7E9 229 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 MRPL44Q9H9J2 332 aaKnown RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PARVGQ9HBI0 331 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF334Q9HCZ1 680 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PTPRHQ9HD43 1115 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 INTS13Q9NVM9 706 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF446Q9NWS9 450 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DPP3Q9NY33 737 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 KCND2Q9NZV8 630 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TBC1D7Q9P0N9 293 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TUBGCP4Q9UGJ1 667 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ODF2LQ9ULJ1 636 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 TBX20Q9UMR3 447 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 EXOC7Q9UPT5 735 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ASB3Q9Y575 518 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PCDHGA2Q9Y5H1 932 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 PIAS3Q9Y6X2 628 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 CACNA1GO43497 2377 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 SCN1AP35498 2009 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ANK1P16157 1881 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 DENND4AQ7Z401 1863 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 FRYLO94915 3013 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 ABCA7Q8IZY2 2146 aa4.15□□□□□ -1.75
ATXN3-240ENST00000556339 MYOFQ9NZM1 2061 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF292O60281 2723 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TTC26A0AVF1 554 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 BICDL2A1A5D9 508 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CTAGE15A4D2H0 777 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 DRGXA6NNA5 263 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 M0QZQ0 153 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CHADO15335 359 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 KRT86O43790 486 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TBC1D4O60343 1298 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 HUS1O60921 280 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 PHF2O75151 1096 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM127O75204 238 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 SOAT2O75908 522 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 OAZ2O95190 189 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 IL18RAPO95256 599 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 IPO7O95373 1038 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 IGLV2-14P01704 120 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 LPLP06858 475 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 KRT19P08727 400 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CTAGE8P0CG41 777 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TYMPP19971 482 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 SCP2P22307 547 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CTSSP25774 331 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 GABRR2P28476 465 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CDC25CP30307 473 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 LRPAP1P30533 357 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CRHR1P34998 444 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CYLC1P35663 651 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 AVPR1AP37288 418 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MPLP40238 635 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 PI4KAP42356 2102 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 RPS9P46781 194 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TAF6P49848 677 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 CCR3P51677 355 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 LGALS4P56470 323 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 LILRA4P59901 499 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MRPS35P82673 323 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 ARHGAP8P85298 464 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TFAMQ00059 246 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TSPY1Q01534 308 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 BFSP1Q12934 665 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MTAPQ13126 283 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MAPK7Q13164 816 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 SIM2Q14190 667 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 TRIM25Q14258 630 aaKnown RBP4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MYBPC2Q14324 1141 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 MEA1Q16626 185 aa4.14□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF528Q3MIS6 628 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms