RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 GALCP54803 685 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 INHBCP55103 352 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 MAP3K7CLP57077 242 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 NXPH1P58417 271 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ASIC1P78348 528 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 C10orf120Q5SQS8 335 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 SFMBT2Q5VUG0 894 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 TMEM215Q68D42 235 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF776Q68DI1 518 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 INO80CQ6PI98 192 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 KDM7AQ6ZMT4 941 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ARHGAP36Q6ZRI8 547 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF662Q6ZS27 426 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 OVCH1Q7RTY7 1134 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 KIF18BQ86Y91 864 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 FUKQ8N0W3 1084 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CARFQ8N187 725 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CRYBG2Q8N1P7 616 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CPXM2Q8N436 756 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ZMIZ2Q8NF64 920 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 GANCQ8TET4 914 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 DDI1Q8WTU0 396 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CHAC2Q8WUX2 184 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CPA5Q8WXQ8 436 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 SORCS1Q8WY21 1168 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ALG3Q92685 438 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 SYAP1Q96A49 352 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 VCPIP1Q96JH7 1222 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ZSCAN31Q96LW9 406 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CDK5RAP1Q96SZ6 601 aaKnown RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 SMOQ99835 787 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 TMPRSS5Q9H3S3 457 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CAAP1Q9H8G2 361 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 POLR1BQ9H9Y6 1135 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 EBF2Q9HAK2 575 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 NMUR1Q9HB89 426 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 PRSS16Q9NQE7 514 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 OLFML3Q9NRN5 406 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 AASDHPPTQ9NRN7 309 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 OSER1Q9NX31 292 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 FBXL12Q9NXK8 326 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CLIC5Q9NZA1 410 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D7Q9P0N9 293 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 ASH2LQ9UBL3 628 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 CLEC4EQ9ULY5 219 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 DUSP10Q9Y6W6 482 aa5.02□□□□□ -1.61
ATXN3-239ENST00000556315 TNRC6BQ9UPQ9 1833 aaKnown RBP5.02□□□□□ -1.61
ATXN3-239ENST00000556315 PTPRDP23468 1912 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 PTPRQQ9UMZ3 2332 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 CITO14578 2027 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 SLC12A8A0AV02 714 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 K7ESM1 405 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 MDM4O15151 490 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 EIF5BO60841 1220 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 RNASEH1O60930 286 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 USP12O75317 370 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 BEST1O76090 585 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 BMP15O95972 392 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 AFPP02771 609 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ATP5BP06576 529 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 DLATP10515 647 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 SFTPCP11686 197 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 GP1BBP13224 206 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 KRT15P19012 456 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 TRIM21P19474 475 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 RBMS1P29558 406 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 CORO1AP31146 461 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 MYL6P60660 151 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 OVGP1Q12889 678 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ARL13BQ3SXY8 428 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 MPPE1Q53F39 396 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 HS1BP3Q53T59 392 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 FIGNQ5HY92 759 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 CT47A1Q5JQC4 288 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 KIAA1614Q5VZ46 1190 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 NCEH1Q6PIU2 408 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 CHST9Q7L1S5 443 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 KANSL1Q7Z3B3 1105 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ACOT1Q86TX2 421 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ADIPOR2Q86V24 386 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 DENND1CQ8IV53 801 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 EXD3Q8N9H8 876 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 CHST14Q8NCH0 376 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 OR2T34Q8NGX1 318 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 SLC2A14Q8TDB8 520 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 WFIKKN2Q8TEU8 576 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 GRAMD1AQ96CP6 724 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 DNAJC19Q96DA6 116 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 TMA16Q96EY4 203 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 SERAC1Q96JX3 654 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms