RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CACNA1HO95180 2353 aa3.96□□□□□ -1.77
LINC00648-202ENST00000555985 A0A1W2PR77 199 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 EIF4E1BA6NMX2 242 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 AP1G1O43747 822 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 FOXD2O60548 495 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 DKK1O94907 266 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ADH1BP00325 375 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 MYZAPP0CAP1 466 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RARAP10276 462 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 OR1E1P30953 314 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 HSPA9P38646 679 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 MPLP40238 635 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ADPRHP54922 357 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 KCNJ2P63252 427 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 DPYSL3Q14195 570 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 IHHQ14623 411 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 DLG2Q15700 870 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TMEM259Q4ZIN3 620 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 BOLA3Q53S33 107 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 EFHC2Q5JST6 749 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 LRRC38Q5VT99 294 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF776Q68DI1 518 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SDE2Q6IQ49 451 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 C22orf39Q6P5X5 142 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ARMCX6Q7L4S7 300 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 KANSL1Q7Z3B3 1105 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TFAP2DQ7Z6R9 452 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SYT12Q8IV01 421 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TP53INP2Q8IXH6 220 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 PCDH20Q8N6Y1 951 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 PQLC3Q8N755 202 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF366Q8N895 744 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ANKS4BQ8N8V4 417 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 BAHD1Q8TBE0 780 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SLC35G2Q8TBE7 412 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF564Q8TBZ8 553 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 MAIP1Q8WWC4 291 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 MAML1Q92585 1016 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 PRCCQ92733 491 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ARRDC3Q96B67 414 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ECHDC3Q96DC8 303 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 HMCESQ96FZ2 354 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SPACA7Q96KW9 195 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RPL10LQ96L21 214 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CSPG4P5Q96PW8 444 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 C2orf49Q9BVC5 232 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CPEB1Q9BZB8 566 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CIPCQ9C0C6 399 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SLC39A8Q9C0K1 460 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 VPS45Q9NRW7 570 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ETNK2Q9NVF9 386 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 GPATCH2LQ9NWQ4 482 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 PLA2G4CQ9UP65 541 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 WASF3Q9UPY6 502 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 GOLGA6L10A0A0M3HER8 536 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 LNP1A1A4G5 178 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RASA4BC9J798 803 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TRAFD1O14545 582 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RASA4O43374 803 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 MAFKO60675 156 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 MOCS3O95396 460 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SERPINF2P08697 491 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CD48P09326 243 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 H2AFZP0C0S5 128 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 GM2AP17900 193 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TCP1P17987 556 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ACSL1P33121 698 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 INHBCP55103 352 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 POLE2P56282 527 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 STARD3Q14849 445 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 AGERQ15109 404 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 AGBL2Q5U5Z8 902 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 NCBP2-AS2Q69YL0 99 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SLC9A4Q6AI14 798 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 C11orf63Q6NUN7 778 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 H2AFVQ71UI9 128 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TRPM8Q7Z2W7 1104 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 PIGWQ7Z7B1 504 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 PIP4P1Q86T03 277 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 LRRC57Q8N9N7 239 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CHST14Q8NCH0 376 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ASB12Q8WXK4 309 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RFFLQ8WZ73 363 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RNF34Q969K3 372 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CENPTQ96BT3 561 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 RMDN1Q96DB5 314 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SIPA1Q96FS4 1042 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 IFT43Q96FT9 208 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 CHMP6Q96FZ7 201 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TOE1Q96GM8 510 aaKnown RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 LRIG1Q96JA1 1093 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF599Q96NL3 588 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 OLFM3Q96PB7 478 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 TRAPPC9Q96Q05 1148 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF670Q9BS34 389 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 NEUROG2Q9H2A3 272 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 ARRDC1-AS1Q9H2J1 176 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 C6orf106Q9H6K1 298 aaPredicted RBP3.96□□□□□ -1.78
LINC00648-202ENST00000555985 EPB41L5Q9HCM4 733 aa3.96□□□□□ -1.78
LINC00648-202ENST00000555985 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms