RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TXNL4AP83876 142 aaKnown RBP16.27■□□□□ 0.2
TUBB3-209ENST00000555609 CSHL1Q14406 222 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 ZNF460Q14592 562 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 MGAT5BQ3V5L5 792 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 FCRL2Q96LA5 508 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-209ENST00000555609 NDNQ99608 321 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 MFSD1Q9H3U5 465 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 MIOSQ9NXC5 875 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 CD300AQ9UGN4 299 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 ST3GAL5Q9UNP4 418 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 VWA7Q9Y334 891 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 CCDC78A2IDD5 438 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 ARL5CA6NH57 179 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 KCNU1A8MYU2 1149 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 M0QZQ0 153 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 PMPCBO75439 489 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 RNASEH2AO75792 299 aaKnown RBP16.27■□□□□ 0.19
TUBB3-209ENST00000555609 WISP3O95389 354 aaPredicted RBP16.27■□□□□ 0.19
TUBB3-209ENST00000555609 SLC2A3P11169 496 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 PSMC3P17980 439 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 IGFBP6P24592 240 aaPredicted RBP16.27■□□□□ 0.19
TUBB3-209ENST00000555609 MYBPC1Q00872 1141 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.19
TUBB3-209ENST00000555609 PRMT9Q6P2P2 845 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 GK5Q6ZS86 529 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 C3orf58Q8NDZ4 430 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 PEX13Q92968 403 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 EME1Q96AY2 570 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 IMP4Q96G21 291 aaKnown RBP16.27■□□□□ 0.19
TUBB3-209ENST00000555609 UROC1Q96N76 676 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 SUDS3Q9H7L9 328 aaPredicted RBP16.27■□□□□ 0.19
TUBB3-209ENST00000555609 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 TMEM181Q9P2C4 612 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 CROTQ9UKG9 612 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 TRAF6Q9Y4K3 522 aa16.27■□□□□ 0.19
TUBB3-209ENST00000555609 NRP2O60462 931 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 ZNF623O75123 536 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 HTRA3P83110 453 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 TSPY1Q01534 308 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 SEPT6Q14141 434 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 AGKQ53H12 422 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 PRAMEF19Q5SWL8 479 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 ARTNQ5T4W7 220 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 HECTD2Q5U5R9 776 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 UMODL1-AS1Q8N2C9 162 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 PCYOX1LQ8NBM8 494 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 TRPC4APQ8TEL6 797 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 ZUFSPQ96AP4 578 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 MARK4Q96L34 752 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 CNBD2Q96M20 576 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 SERPINB11Q96P15 392 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 CYP2S1Q96SQ9 504 aa16.26■□□□□ 0.19
TUBB3-209ENST00000555609 DYTNA2CJ06 578 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 TMEM233B4DJY2 109 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 E7ENX8 843 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 E9PAM4 449 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 STX16-NPEPL1H3BU86 382 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 VILLO15195 856 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 GPR182O15218 404 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 SRP72O76094 671 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 CCDC166P0CW27 439 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 TYMPP19971 482 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 MLLT6P55198 1093 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 STX1BP61266 288 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 USP46P62068 366 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 FKBP1BP68106 108 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 IL23RQ5VWK5 629 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 AGMOQ6ZNB7 445 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 RBM44Q6ZP01 1051 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 CTU1Q7Z7A3 348 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 OLFM1Q99784 485 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 HOPXQ9BPY8 73 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 TRIM15Q9C019 465 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 RBM38Q9H0Z9 239 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 POPDC3Q9HBV1 291 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 ACSS2Q9NR19 701 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 TMCO1Q9UM00 188 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 MTF2Q9Y483 593 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 SHROOM3Q8TF72 1996 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 FBP2O00757 339 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 MRASO14807 208 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 PGM3O95394 542 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 FGF4P08620 206 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 HNRNPLP14866 589 aaKnown RBP eCLIP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 SCNN1GP51170 649 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 INHBEP58166 350 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 NAA20P61599 178 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 RBM20Q5T481 1227 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 ACBD5Q5T8D3 534 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 LARP4Q71RC2 724 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■■■ 28.5
TUBB3-209ENST00000555609 CILP2Q8IUL8 1156 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 CHERPQ8IWX8 916 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 CLYBLQ8N0X4 340 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 PACRGLQ8N7B6 248 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 ANKFN1Q8N957 763 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 LPGAT1Q92604 370 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 SGF29Q96ES7 293 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms