RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 STAT4Q14765 748 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 FASTKD3Q14CZ7 662 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 MLF2Q15773 248 aaPredicted RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 SKIDA1Q1XH10 827 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 HSF5Q4G112 596 aaPredicted RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 ARSIQ5FYB1 569 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 EGFLAMQ63HQ2 1017 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 NAIF1Q69YI7 327 aaPredicted RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 PKN3Q6P5Z2 889 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 LRIG3Q6UXM1 1119 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 TPRG1Q6ZUI0 275 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 USP45Q70EL2 814 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 TMIEQ8NEW7 156 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 GSDMBQ8TAX9 411 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 GRIN3AQ8TCU5 1115 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 BRSK1Q8TDC3 778 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 BLOC1S5Q8TDH9 187 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 CDKL2Q92772 493 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 TRIB3Q96RU7 358 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 RANBP9Q96S59 729 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 FUT8Q9BYC5 575 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 TMEM245Q9H330 911 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 TRABDQ9H4I3 376 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 MRM3Q9HC36 420 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 LRRC4CQ9HCJ2 640 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 FBRSL1Q9HCM7 1045 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 PRDM6Q9NQX0 595 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 SYBUQ9NX95 663 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 CACNA2D2Q9NY47 1150 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 FBXL21Q9UKT6 434 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 SOX13Q9UN79 622 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 PLAAQ9Y263 795 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 TCAF1Q9Y4C2 921 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 RPS6KL1Q9Y6S9 549 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 K7EQS6 105 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 TRAFD1O14545 582 aaPredicted RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 OPA1O60313 960 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 FZD6O60353 706 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 SIN3BO75182 1162 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 LEFTY1O75610 366 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 USP1O94782 785 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 EGFP01133 1207 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 PDHA1P08559 390 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 NUDT17P0C025 328 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 HLA-EP13747 358 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 SSTR1P30872 391 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 GKP32189 559 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ABL2P42684 1182 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 IL12RB1P42701 662 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 FAM193AP78312 1265 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 CRADDP78560 199 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ZP2Q05996 745 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 SFSWAPQ12872 951 aaKnown RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 IHHQ14623 411 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 QPCTQ16769 361 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 KLHL38Q2WGJ6 581 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ANKRD20A4Q4UJ75 823 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 C2orf27AQ580R0 203 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF805Q5CZA5 627 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 EOGTQ5NDL2 527 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 C9orf64Q5T6V5 341 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 EMC10Q5UCC4 262 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 FSTL4Q6MZW2 842 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 TXNDC11Q6PKC3 985 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 UNC5AQ6ZN44 842 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 GLT6D1Q7Z4J2 308 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 CNPY4Q8N129 248 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 STK40Q8N2I9 435 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 MPP5Q8N3R9 675 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF366Q8N895 744 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 CHST14Q8NCH0 376 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 UHMK1Q8TAS1 419 aaKnown RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 PEX13Q92968 403 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF669Q96BR6 464 aaPredicted RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 KLHL32Q96NJ5 620 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 CYTH2Q99418 400 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 NELL2Q99435 816 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 KIFC1Q9BW19 673 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 GPR63Q9BZJ6 419 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 PPCSQ9HAB8 311 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 FBRSQ9HAH7 460 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 MAGEE1Q9HCI5 957 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 PPANQ9NQ55 473 aaKnown RBP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 CHRAC1Q9NRG0 131 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 DKK3Q9UBP4 350 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 WNT16Q9UBV4 365 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 IKBKGQ9Y6K9 419 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 FAM169AQ9Y6X4 670 aa10.52□□□□□ -0.73
TMEM55B-205ENST00000554028 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 EXOC1LA0A1B0GW35 172 aa10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 PAPSS2O95340 614 aaPredicted RBP10.51□□□□□ -0.73
TMEM55B-205ENST00000554028 PRLP01236 227 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms