RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PABPC5Q96DU9 382 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TCEAL4Q96EI5 215 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 XPO6Q96QU8 1125 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PRMT1Q99873 361 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TMEM121Q9BTD3 319 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 PARD6BQ9BYG5 372 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SLC2A11Q9BYW1 496 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FRMD8Q9BZ67 464 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 MAGEB5Q9BZ81 275 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 S1PR5Q9H228 398 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TRPV4Q9HBA0 871 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SMPD4Q9NXE4 827 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CLDND1Q9NY35 253 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SMARCAL1Q9NZC9 954 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 DTLQ9NZJ0 730 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 MPP6Q9NZW5 540 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 WHRNQ9P202 907 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 KIAA1522Q9P206 1035 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CFAP97Q9P2B7 532 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 MTRF1LQ9UGC7 380 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 ASIC3Q9UHC3 531 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 TRHDEQ9UKU6 1024 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 CDH7Q9ULB5 785 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 SMG5Q9UPR3 1016 aaKnown RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 FAM50BQ9Y247 325 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 NR2E1Q9Y466 385 aa5.11□□□□□ -1.59
VTI1B-202ENST00000553619 COL4A4P53420 1690 aaPredicted RBP5.11□□□□□ -1.59
VTI1B-202ENST00000553619 GOLGA6L7A0A1B0GV03 622 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CCDC151A5D8V7 595 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RASA4BC9J798 803 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 E7EVH7 732 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 DFFAO00273 331 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 MATN3O15232 486 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 KCNN4O15554 427 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RASA4O43374 803 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 TSPAN3O60637 253 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 OPHN1O60890 802 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 MOSPD3O75425 235 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NFATC1O95644 943 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 KLKB1P03952 638 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RHOCP08134 193 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RBL1P28749 1068 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 TNFRSF8P28908 595 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NNMTP40261 264 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 GARSP41250 739 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 TNNT3P45378 269 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 LMAN1P49257 510 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 LINC00310P59036 64 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NTHL1P78549 312 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CDK16Q00536 496 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 GNA12Q03113 381 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 GAD2Q05329 585 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SULT2A1Q06520 285 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 IL10RBQ08334 325 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ADCY2Q08462 1091 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 PPIDQ08752 370 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 GALNT2Q10471 571 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SLC10A2Q12908 348 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CDH18Q13634 790 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 HNRNPDQ14103 355 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 HLTFQ14527 1009 aaKnown RBP eCLIP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 DMC1Q14565 340 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RFTN1Q14699 578 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CBX2Q14781 532 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 PDGFRLQ15198 375 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 OASLQ15646 514 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 PARP6Q2NL67 630 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 TEX44Q53QW1 395 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 FAM133BQ5BKY9 247 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ANKRD20A2Q5SQ80 823 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ANKRD20A1Q5TYW2 823 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 MARC1Q5VT66 337 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ANKRD20A3Q5VUR7 823 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 DUPD1Q68J44 220 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 IL31Q6EBC2 164 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NADSYN1Q6IA69 706 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RFWD3Q6PCD5 774 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SYCE2Q6PIF2 218 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NPNTQ6UXI9 565 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ARHGEF18Q6ZSZ5 1173 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ANKS1BQ7Z6G8 1248 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NLRP14Q86W24 1093 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 MFN1Q8IWA4 741 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 MFSD6LQ8IWD5 586 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF683Q8IZ20 524 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ZDHHC14Q8IZN3 488 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CARNMT1Q8N4J0 409 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ATPAF2Q8N5M1 289 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NOA1Q8NC60 698 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 FIBINQ8TAL6 211 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ITFG1Q8TB96 612 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 DEPDC1BQ8WUY9 529 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 OSCP1Q8WVF1 389 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 HNRNPLLQ8WVV9 542 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CASKIN2Q8WXE0 1202 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 IFT81Q8WYA0 676 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ING5Q8WYH8 240 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ATG4AQ8WYN0 398 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 FGF13Q92913 245 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms