RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 OTOGQ6ZRI0 2925 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 WIPF3A6NGB9 483 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 GRAP2O75791 330 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 MPSTP25325 297 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 MAZP56270 477 aaKnown RBP13.92□□□□□ -0.18
PRPF39-204ENST00000553605 NR1D2Q14995 579 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 MYLK3Q32MK0 819 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 EFHC1Q5JVL4 640 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 FOXR2Q6PJQ5 311 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 GDPD4Q6W3E5 623 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 TIPARPQ7Z3E1 657 aaKnown RBP13.92□□□□□ -0.18
PRPF39-204ENST00000553605 OR2AP1Q8NGE2 309 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 CCL4L1Q8NHW4 92 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 RTP4Q96DX8 246 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 WDCPQ9H6R7 721 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
PRPF39-204ENST00000553605 ANLNQ9NQW6 1124 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 MAP4K5Q9Y4K4 846 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 PCDHB3Q9Y5E6 796 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 CHD5Q8TDI0 1954 aa13.92□□□□□ -0.18
PRPF39-204ENST00000553605 TMEM202A6NGA9 273 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 I6L893 689 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 HSF2BPO75031 334 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 THRAP10827 490 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 SNRPD1P62314 119 aaKnown RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 GNA12Q03113 381 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 POLD3Q15054 466 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 TMEM52BQ4KMG9 183 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 NKAIN2Q5VXU1 208 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 RRAGAQ7L523 313 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 C17orf82Q86X59 251 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 BMPERQ8N8U9 685 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 OR56A4Q8NGH8 313 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 PRR7Q8TB68 274 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 MOCOSQ96EN8 888 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 TRIT1Q9H3H1 467 aaKnown RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 METTL14Q9HCE5 456 aaKnown RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 CYP4F12Q9HCS2 524 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 PIGVQ9NUD9 493 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 SPATS2LQ9NUQ6 558 aaKnown RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 ARHGEF38Q9NXL2 777 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 TLK1Q9UKI8 766 aa13.91□□□□□ -0.18
PRPF39-204ENST00000553605 MRPS18BQ9Y676 258 aaKnown RBP13.91□□□□□ -0.18
PRPF39-204ENST00000553605 IGLV3-10A0A075B6K4 115 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 MED7O43513 233 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 SRGAP2O75044 1071 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 RFPL1O75677 317 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 GSRP00390 522 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 PDGFAP04085 211 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 PCCBP05166 539 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 GPR3P46089 330 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 PDCLQ13371 301 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 BIRC2Q13490 618 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 SQSTM1Q13501 440 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 MEA1Q16626 185 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 BRMS1LQ5PSV4 323 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 C1orf74Q96LT6 269 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 CTRCQ99895 268 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
PRPF39-204ENST00000553605 FGF22Q9HCT0 170 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 USP25Q9UHP3 1055 aa13.9□□□□□ -0.18
PRPF39-204ENST00000553605 CXorf51AA0A1B0GTR3 108 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 TCP11X1B4DZS4 312 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 CACNB4O00305 520 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 STK17BO94768 372 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ECEL1O95672 775 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 LDLRP01130 860 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 FGF1P05230 155 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 GRNP28799 593 aaKnown RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 MAN1A1P33908 653 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 FMO5P49326 533 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 CXCR3P49682 368 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 MC2RQ01718 297 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ELP6Q0PNE2 266 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 MRPL49Q13405 166 aaKnown RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 MTM1Q13496 603 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 CEACAM20Q6UY09 585 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ZDHHC1Q8WTX9 485 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ZNF606Q8WXB4 792 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 FUBP1Q96AE4 644 aaKnown RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 DPYSL5Q9BPU6 564 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ZPBPQ9BS86 351 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 ZNF212Q9UDV6 495 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 MOSPD1Q9UJG1 213 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 POLHQ9Y253 713 aa13.89□□□□□ -0.19
PRPF39-204ENST00000553605 TMEM184BQ9Y519 407 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-204ENST00000553605 IGHV1OR21-1A0A087WYE8 117 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 TNFRSF10CO14798 259 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 SLC16A3O15427 465 aaKnown RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 KRT5P13647 590 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 XPAP23025 273 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 KELP23276 732 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 F8A1P23610 371 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms