RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	DKK3	Q9UBP4	350 aa		11.7	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.7	□□□□□ -0.54
CNOT2-223	ENST00000550160	PHTF1	Q9UMS5	762 aa		11.7	□□□□□ -0.54
CNOT2-223	ENST00000550160	CHMP2B	Q9UQN3	213 aa		11.7	□□□□□ -0.54
CNOT2-223	ENST00000550160	WASF2	Q9Y6W5	498 aa		11.7	□□□□□ -0.54
CNOT2-223	ENST00000550160	MIA3	Q5JRA6	1907 aa		11.7	□□□□□ -0.54
CNOT2-223	ENST00000550160	KANSL1L	A0AUZ9	987 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ANKRD66	B4E2M5	251 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	FZD6	O60353	706 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ATG13	O75143	517 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	RNF40	O75150	1001 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	AVIL	O75366	819 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	CRTAM	O95727	393 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	TTC4	O95801	387 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ADH1B	P00325	375 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	PRL	P01236	227 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	GSTA2	P09210	222 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ATXN1L	P0C7T5	689 aa	Known RBP	11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	HOXB2	P14652	356 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	TPH1	P17752	444 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	PGAM1	P18669	254 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	CD72	P21854	359 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ADRA1D	P25100	572 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	GK	P32189	559 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ELK3	P41970	407 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	WAS	P42768	502 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	STARD6	P59095	220 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	PDE1B	Q01064	536 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	CCDC15	Q0P6D6	951 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	MTM1	Q13496	603 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	POU6F1	Q14863	301 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	UBXN2B	Q14CS0	331 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ARSI	Q5FYB1	569 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	PCID2	Q5JVF3	399 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZNF776	Q68DI1	518 aa	Predicted RBP	11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	DENND5A	Q6IQ26	1287 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	FBXO38	Q6PIJ6	1188 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	NLRP9	Q7RTR0	991 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	GLT6D1	Q7Z4J2	308 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ANKMY2	Q8IV38	441 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	SIX5	Q8N196	739 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	MREG	Q8N565	214 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	IL17RC	Q8NAC3	791 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	FBXO36	Q8NEA4	188 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	PIP4K2C	Q8TBX8	421 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	BLOC1S5	Q8TDH9	187 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	ECHDC3	Q96DC8	303 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	C9orf72	Q96LT7	481 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	KLHL32	Q96NJ5	620 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	RANBP9	Q96S59	729 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	TRABD	Q9H4I3	376 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	VPS37B	Q9H9H4	285 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	SYBU	Q9NX95	663 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	PPM1H	Q9ULR3	514 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	TEX264	Q9Y6I9	313 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	MYO10	Q9HD67	2058 aa		11.69	□□□□□ -0.54
CNOT2-223	ENST00000550160	FAM237B	A0A1B0GVD1	139 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	TSPAN11	A1L157	253 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	CAPN8	A6NHC0	703 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	C2orf81	A6NN90	581 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	UPK3BL1	B0FP48	263 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	UPK3BL2	E5RIL1	263 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	IL1B	P01584	269 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	POLB	P06746	335 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	PDHA1	P08559	390 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	CYP2A6	P11509	494 aa	Predicted RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	PAM	P19021	973 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	ITGB7	P26010	798 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	SUOX	P51687	545 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	SFSWAP	Q12872	951 aa	Known RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	IHH	Q14623	411 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	QPCT	Q16769	361 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	MSS51	Q4VC12	460 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	CERCAM	Q5T4B2	595 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	DENND2C	Q68D51	928 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	ERAP2	Q6P179	960 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	FBXL19	Q6PCT2	694 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	TXNDC5	Q8NBS9	432 aa	Known RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	OR2T3	Q8NH03	318 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	RPLP0P6	Q8NHW5	317 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	BRSK1	Q8TDC3	778 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	PIH1D2	Q8WWB5	315 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	ANKRD7	Q92527	254 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	CFAP36	Q96G28	342 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	SIGLEC10	Q96LC7	697 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	FAM129B	Q96TA1	746 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	PABPC3	Q9H361	631 aa	Known RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	MRM3	Q9HC36	420 aa	Known RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	MAGEE1	Q9HCI5	957 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	LTB4R2	Q9NPC1	389 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZDHHC4	Q9NPG8	344 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	HCN2	Q9UL51	889 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	MMP17	Q9ULZ9	603 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms