RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 LEFTY1O75610 366 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 USP1O94782 785 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 PAPSS2O95340 614 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CRTAMO95727 393 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 UGT2B4P06133 528 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CHRM1P11229 460 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 BMP1P13497 986 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 HLA-EP13747 358 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 TPH1P17752 444 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 TIE1P35590 1138 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CAMK2GQ13555 558 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CCINQ13939 588 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 FRG1Q14331 258 aaKnown RBP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 GALNT3Q14435 633 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CASP8Q14790 479 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 FASTKD3Q14CZ7 662 aaKnown RBP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 KYNUQ16719 465 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 ZNF805Q5CZA5 627 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 ARSIQ5FYB1 569 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 SPANXN3Q5MJ09 141 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 EOGTQ5NDL2 527 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CERCAMQ5T4B2 595 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 EMC10Q5UCC4 262 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 STEAP4Q687X5 459 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 PKN3Q6P5Z2 889 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 ZNF449Q6P9G9 518 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 CYS1Q717R9 158 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 ANKMY2Q8IV38 441 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 STK40Q8N2I9 435 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 AGGF1Q8N302 714 aaeCLIP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 VOPP1Q96AW1 172 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 C19orf43Q9BQ61 176 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 MAGEE1Q9HCI5 957 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 PRSS16Q9NQE7 514 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 PIH1D1Q9NWS0 290 aaKnown RBP17.5■□□□□ 0.39
LETMD1-220ENST00000549686 FBXL21Q9UKT6 434 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 PPM1HQ9ULR3 514 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 PPIL1Q9Y3C6 166 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 TCAF1Q9Y4C2 921 aa17.5■□□□□ 0.39
LETMD1-220ENST00000549686 MUC22E2RYF6 1773 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-220ENST00000549686 A0A087WUV0 522 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-220ENST00000549686 A0A0J9YYE9 177 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 BANF1O75531 89 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 TRBC1P01850 177 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 PDHA1P08559 390 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 NUDT17P0C025 328 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 GKP32189 559 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 STX2P32856 288 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 SEC13P55735 322 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 STARD6P59095 220 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 MSLNQ13421 630 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-220ENST00000549686 MTM1Q13496 603 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 POU6F1Q14863 301 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 ALS2CLQ60I27 953 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 USP45Q70EL2 814 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 TMEM135Q86UB9 458 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 MPP5Q8N3R9 675 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 ZNF366Q8N895 744 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 GRIN3AQ8TCU5 1115 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 KLHL32Q96NJ5 620 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 LYSMD1Q96S90 227 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 ACOX2Q99424 681 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 WDR83Q9BRX9 315 aaKnown RBP17.49■□□□□ 0.39
LETMD1-220ENST00000549686 LRRC4CQ9HCJ2 640 aa17.49■□□□□ 0.39
LETMD1-220ENST00000549686 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.49■□□□□ 0.394e-7■□□□□ 10.3
LETMD1-220ENST00000549686 CAPN8A6NHC0 703 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 SHISA7A6NL88 538 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 C2orf81A6NN90 581 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 ACSL3O95573 720 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 CTSLP07711 333 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 PAMP19021 973 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 ITGB7P26010 798 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 EIF3BP55884 814 aaKnown RBP17.48■□□□□ 0.39
LETMD1-220ENST00000549686 CCDC15Q0P6D6 951 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 TAF1AQ15573 450 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-220ENST00000549686 UAP1Q16222 522 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-220ENST00000549686 C2orf27AQ580R0 203 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 HP1BP3Q5SSJ5 553 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-220ENST00000549686 UNC5AQ6ZN44 842 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 C3orf62Q6ZUJ4 267 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 CROCCP2Q86T23 111 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 IGDCC3Q8IVU1 814 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 IL17RCQ8NAC3 791 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 OR2T3Q8NH03 318 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 GSDMBQ8TAX9 411 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 PIP4K2CQ8TBX8 421 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 SCRN2Q96FV2 425 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 CFAP36Q96G28 342 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 MCCC1Q96RQ3 725 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-220ENST00000549686 FAM129BQ96TA1 746 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 CCDC77Q9BR77 488 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 RSPH9Q9H1X1 276 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-220ENST00000549686 ACBD3Q9H3P7 528 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 MTG2Q9H4K7 406 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 VPS37BQ9H9H4 285 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 PPCSQ9HAB8 311 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 DYRK4Q9NR20 520 aa17.48■□□□□ 0.39
LETMD1-220ENST00000549686 CA14Q9ULX7 337 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms