RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 TDRD1Q9BXT4 1180 aaKnown RBP19.25■□□□□ 0.67
BRF1-215ENST00000549655 TASP1Q9H6P5 420 aa19.25■□□□□ 0.67
BRF1-215ENST00000549655 LZTS1Q9Y250 596 aa19.25■□□□□ 0.67
BRF1-215ENST00000549655 ZNF510Q9Y2H8 683 aa19.25■□□□□ 0.67
BRF1-215ENST00000549655 SLC4A7Q9Y6M7 1214 aa19.25■□□□□ 0.67
BRF1-215ENST00000549655 G3V2L1 256 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 LYPLA1O75608 230 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 KITP10721 976 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 RALBP11234 206 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 COL6A2P12110 1019 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 GRK2P25098 689 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 DNAJB1P25685 340 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 TAS2R39P59534 338 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 POU4F1Q01851 419 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 PPM1LQ5SGD2 360 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 LCA5Q86VQ0 697 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 MFN1Q8IWA4 741 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 TDRD5Q8NAT2 981 aaKnown RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 KCTD4Q8WVF5 259 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 RMDN1Q96DB5 314 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 ALG14Q96F25 216 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 OMDQ99983 421 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 SLC46A2Q9BY10 475 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 SUDS3Q9H7L9 328 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 HEY2Q9UBP5 337 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 MARCOQ9UEW3 520 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 VPS51Q9UID3 782 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 RUVBL2Q9Y230 463 aaKnown RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 DOCK6Q96HP0 2047 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 PRLP01236 227 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 APOA4P06727 396 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 SLC12A2P55011 1212 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 ITGA9Q13797 1035 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 INO80DQ53TQ3 878 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 RBM20Q5T481 1227 aaKnown RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 GALNT7Q86SF2 657 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 LDB1Q86U70 411 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 CENPLQ8N0S6 344 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 PNPLA1Q8N8W4 532 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 NDNQ99608 321 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 HCFC1R1Q9NWW0 138 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 KCNK4Q9NYG8 393 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 MARCH4Q9P2E8 410 aaPredicted RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 CPSF2Q9P2I0 782 aaKnown RBP19.24■□□□□ 0.67
BRF1-215ENST00000549655 ZFP69BQ9UJL9 534 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 PCDHGC4Q9Y5F7 938 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 RAI2Q9Y5P3 530 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 NUMBLQ9Y6R0 609 aa19.24■□□□□ 0.67
BRF1-215ENST00000549655 PDHA1P08559 390 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 CLCN5P51795 746 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 LMNTD2Q8IXW0 634 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 CPXM2Q8N436 756 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 OR13C4Q8NGS5 318 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 STYXQ8WUJ0 223 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 POF1BQ8WVV4 589 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 SMG9Q9H0W8 520 aaKnown RBP19.23■□□□□ 0.67
BRF1-215ENST00000549655 LHX3Q9UBR4 397 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 RIMKLBQ9ULI2 386 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 SPO11Q9Y5K1 396 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 LEFTY2O00292 366 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 DNAJC6O75061 913 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 RPP40O75818 363 aaKnown RBP19.23■□□□□ 0.67
BRF1-215ENST00000549655 CRTAMO95727 393 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 S1PR4O95977 384 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 GOT2P00505 430 aaKnown RBP19.23■□□□□ 0.67
BRF1-215ENST00000549655 CCR2P41597 374 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 GLRBP48167 497 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 CLCN4P51793 760 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 NSUN2Q08J23 767 aaKnown RBP eCLIP19.23■□□□□ 0.67
BRF1-215ENST00000549655 TPGS1Q6ZTW0 290 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 TMEM151AQ8N4L1 468 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 DCAF4L2Q8NA75 395 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 LPCAT1Q8NF37 534 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 SPPL3Q8TCT6 385 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 HERVK_113Q902F9 699 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 SCYL1Q96KG9 808 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 PLK2Q9NYY3 685 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 MID2Q9UJV3 735 aa19.23■□□□□ 0.67
BRF1-215ENST00000549655 FCF1Q9Y324 198 aaKnown RBP19.23■□□□□ 0.67
BRF1-215ENST00000549655 ALPK3Q96L96 1907 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 ANKRD36A6QL64 1941 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 MTCL1Q9Y4B5 1905 aaKnown RBP19.22■□□□□ 0.67
BRF1-215ENST00000549655 A0A087X1B8 175 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 CCDC162PA2VCL2 907 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 TK2O00142 265 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 UNC5CO95185 931 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 GLP2RO95838 553 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 SERPINB3P29508 390 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 SKIV2L2P42285 1042 aaKnown RBP19.22■□□□□ 0.67
BRF1-215ENST00000549655 ABCE1P61221 599 aaKnown RBP19.22■□□□□ 0.67
BRF1-215ENST00000549655 HSF5Q4G112 596 aaPredicted RBP19.22■□□□□ 0.67
BRF1-215ENST00000549655 CLNKQ7Z7G1 428 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 APCDD1Q8J025 514 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 OR6Y1Q8NGX8 325 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 NXNL1Q96CM4 212 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 OLFM1Q99784 485 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 TLR9Q9NR96 1032 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 TXLNGQ9NUQ3 528 aa19.22■□□□□ 0.67
BRF1-215ENST00000549655 DNMT3BQ9UBC3 853 aaKnown RBP19.22■□□□□ 0.67
BRF1-215ENST00000549655 DNAJC16Q9Y2G8 782 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms