RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 NAA15Q9BXJ9 866 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 STK33Q9BYT3 514 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 NUP62CLQ9H1M0 184 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 NOL6Q9H6R4 1146 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 PCDH12Q9NPG4 1184 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 NLRC4Q9NPP4 1024 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 TMEM51Q9NW97 253 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 NEU3Q9UQ49 428 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 LOXL2Q9Y4K0 774 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 KALRNO60229 2985 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 PRAMEF33A0A0G2JMD5 474 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 C2CD4BA6NLJ0 364 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 TMEM110-MUSTN1A8MSY1 372 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 RASA4BC9J798 803 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 D6RAR5 112 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 F8VZ95 297 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 RASA4O43374 803 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 PRAMEF10O60809 474 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 FAM87AP0C7U9 286 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 KRT3P12035 628 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 CHRNB2P17787 502 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 ERCC5P28715 1186 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 RFC1P35251 1148 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 ETV5P41161 510 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 LIG3P49916 1009 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 FMO1Q01740 532 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 NRG1Q02297 640 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 ELP6Q0PNE2 266 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 NFATC4Q14934 902 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 UGP2Q16851 508 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 MANEAQ5SRI9 462 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 CFAP58Q5T655 872 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 PHF19Q5T6S3 580 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 WDR59Q6PJI9 974 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 CAMK1DQ8IU85 385 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 CCNJLQ8IV13 435 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 CCL4L1Q8NHW4 92 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 USP7Q93009 1102 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 SGF29Q96ES7 293 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 PDXPQ96GD0 296 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 TBATAQ96M53 351 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 WDR92Q96MX6 357 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 TMEM74Q96NL1 305 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 VPS16Q9H269 839 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 DPEP2Q9H4A9 486 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 SUV39H2Q9H5I1 410 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 TAB2Q9NYJ8 693 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 LHX3Q9UBR4 397 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 DACH1Q9UI36 760 aa12.05□□□□□ -0.48
TRAFD1-205ENST00000548277 TMEM202A6NGA9 273 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 ZSCAN5CA6NGD5 496 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 B4DGG1 531 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 J3KR12 359 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 TOR1BO14657 336 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 BUB1BO60566 1050 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 GPD1P21695 349 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 MMP8P22894 467 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 MLLT3P42568 568 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 PEX5P50542 639 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 CDR2Q01850 454 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 ARHGEF7Q14155 803 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 AMZ1Q400G9 498 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 ERAP2Q6P179 960 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 ARCQ7LC44 396 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 STRADAQ7RTN6 431 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 TMPRSS9Q7Z410 1059 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 ZSWIM9Q86XI8 627 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 RTL3Q8N8U3 475 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 OR1E3Q8WZA6 343 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 CELF6Q96J87 481 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 PCDHB18PQ96TA0 734 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 CYP4F12Q9HCS2 524 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 LMBRD1Q9NUN5 540 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 SEPT11Q9NVA2 429 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 FOXJ2Q9P0K8 574 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 LRIT1Q9P2V4 623 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 UBA2Q9UBT2 640 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 IL17BQ9UHF5 180 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 NOCTQ9UK39 431 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 RNF215Q9Y6U7 377 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 PIEZO2Q9H5I5 2752 aa12.04□□□□□ -0.48
TRAFD1-205ENST00000548277 MYO18BQ8IUG5 2567 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 TMX2-CTNND1H3BSU7 103 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 TEX33O43247 280 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 CCP110O43303 1012 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 LIPCP11150 499 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 WT1P19544 449 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 PTPN9P43378 593 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 EIF3IQ13347 325 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 SERINC3Q13530 473 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 INO80DQ53TQ3 878 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 EFHC2Q5JST6 749 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 DENND2CQ68D51 928 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms