RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 RPL36AP83881 106 aaKnown RBP2.37□□□□□ -2.03
CEP290-204ENST00000547926 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.37□□□□□ -2.03
CEP290-204ENST00000547926 MYBPHQ13203 477 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 RHBDF2Q6PJF5 856 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 SLC22A25Q6T423 547 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 SFTPA2Q8IWL1 248 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 LILRB1Q8NHL6 650 aaPredicted RBP2.37□□□□□ -2.03
CEP290-204ENST00000547926 GAREM1Q9H706 876 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 BABAM1Q9NWV8 329 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 HSPB7Q9UBY9 170 aa2.37□□□□□ -2.03
CEP290-204ENST00000547926 SMTNL1A8MU46 457 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 BTBD18B2RXH4 712 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 TEX22C9J3V5 150 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 NPIPB11E5RHQ5 1161 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 ZNF8P17098 575 aaPredicted RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 NR1H2P55055 460 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 HDAC4P56524 1084 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 EFNB1P98172 346 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 ST3GAL1Q11201 340 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 TRAF2Q12933 501 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 GRIK3Q13003 919 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 COASYQ13057 564 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 ARHGEF6Q15052 776 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 EFNB3Q15768 340 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 XKR9Q5GH70 373 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 ZNF766Q5HY98 468 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 FAM76BQ5HYJ3 339 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 SERTAD4-AS1Q5TG53 156 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 FAM69BQ5VUD6 431 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 BSPRYQ5W0U4 402 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 H1FNTQ75WM6 255 aaPredicted RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 SHFQ7M4L6 423 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 GPAT4Q86UL3 456 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 SPEM1Q8N4L4 309 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 ZNF114Q8NC26 417 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 SNAPC3Q92966 411 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 RTP4Q96DX8 246 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 SCMH1Q96GD3 660 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 ZC3HAV1LQ96H79 300 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 MPHOSPH8Q99549 860 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 C1QTNF4Q9BXJ3 329 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 DDX4Q9NQI0 724 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 A3GALT2U3KPV4 340 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 A0A0U1RQJ8 604 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 A0A1B0GUV1 79 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 hDV102S1A0JD36 115 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 HSPA12AO43301 675 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 TACC1O75410 805 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 GALTP07902 379 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 HNRNPA1P09651 372 aaKnown RBP eCLIP2.36□□□□□ -2.03
CEP290-204ENST00000547926 PTPN2P17706 415 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 FMO4P31512 558 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 PSMC2P35998 433 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 MAPK9P45984 424 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 PPM1FP49593 454 aaPredicted RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 CDH15P55291 814 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 YWHAZP63104 245 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 DCAF6Q58WW2 860 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 HIST2H2BDQ6DRA6 164 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 LRRC8DQ7L1W4 858 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 TCP11L2Q8N4U5 519 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 MYRIPQ8NFW9 859 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 TNIP2Q8NFZ5 429 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 CSF3RQ99062 836 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 MXRA8Q9BRK3 442 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 GLIS2Q9BZE0 524 aaPredicted RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 INTS2Q9H0H0 1204 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 DDX31Q9H8H2 851 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 NOX4Q9NPH5 578 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 BEX4Q9NWD9 120 aaPredicted RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 CISD1Q9NZ45 108 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 KIAA1456Q9P272 454 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 SLC9A2Q9UBY0 812 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 CNOT7Q9UIV1 285 aaKnown RBP2.36□□□□□ -2.03
CEP290-204ENST00000547926 ICAM5Q9UMF0 924 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 NFE2L3Q9Y4A8 694 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 MMP24Q9Y5R2 645 aa2.36□□□□□ -2.03
CEP290-204ENST00000547926 PLSCR5A0PG75 271 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 RRN3P2A6NIE6 340 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 NCAM2O15394 837 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 PYGLP06737 847 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 BRWD1-AS2P59051 145 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 ERVFC1-1P60608 527 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 GALNT2Q10471 571 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 BIRC3Q13489 604 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 SLC39A14Q15043 492 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 EFHC1Q5JVL4 640 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 PAPPA-AS1Q5QFB9 102 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TMEM81Q6P7N7 255 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 B3GNT6Q6ZMB0 384 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TADA2BQ86TJ2 420 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 DHX40Q8IX18 779 aaKnown RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 SPATA20Q8TB22 786 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 ADGRG7Q96K78 797 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 ZNF556Q9HAH1 456 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 C20orf141Q9NUB4 165 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 SLC25A10Q9UBX3 287 aaPredicted RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 MALT1Q9UDY8 824 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 PAM16Q9Y3D7 125 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms