RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 NETO2Q8NC67 525 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 SLC20A1Q8WUM9 679 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 SEMA3CQ99985 751 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 STK33Q9BYT3 514 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 FAM117AQ9C073 453 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 IL17BQ9UHF5 180 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 DGKBQ9Y6T7 804 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 HECTD1Q9ULT8 2610 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 NAV2Q8IVL1 2488 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 HTR1BP28222 390 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 GSCP56915 257 aaPredicted RBP16.81■□□□□ 0.28
CPSF7-225ENST00000545934 RHOAP61586 193 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 PTP4A2Q12974 167 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 CYTH1Q15438 398 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 UGP2Q16851 508 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 CERCAMQ5T4B2 595 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 JAMLQ86YT9 394 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 CCNJLQ8IV13 435 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 RTL3Q8N8U3 475 aaKnown RBP16.81■□□□□ 0.28
CPSF7-225ENST00000545934 EXTL1Q92935 676 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 TMEM159Q96B96 161 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 PDXPQ96GD0 296 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 WDR92Q96MX6 357 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 PISDQ9UG56 409 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 LOXL2Q9Y4K0 774 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 OR1A2Q9Y585 309 aa16.81■□□□□ 0.28
CPSF7-225ENST00000545934 WASH4PA8MWX3 477 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 SUV39H1O43463 412 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 PIGNO95427 931 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 PRKCSHP14314 528 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-225ENST00000545934 GLB1P16278 677 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 CHRNB2P17787 502 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 ITIH1P19827 911 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 MMP12P39900 470 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 ETV5P41161 510 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 YBEYP58557 167 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-225ENST00000545934 FMO1Q01740 532 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 MTM1Q13496 603 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 SERINC3Q13530 473 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 TCEA2Q15560 299 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 ZSWIM9Q86XI8 627 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 SLITRK4Q8IW52 837 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 ATL2Q8NHH9 583 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 HMCESQ96FZ2 354 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 B3GNT4Q9C0J1 378 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 PDFQ9HBH1 243 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 PCDH12Q9NPG4 1184 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 KLQ9UEF7 1012 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 PCDHGA4Q9Y5G9 962 aa16.8■□□□□ 0.28
CPSF7-225ENST00000545934 PRAMEF33A0A0G2JMD5 474 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 CFAP69A5D8W1 941 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 C9orf172C9J069 976 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 PRAMEF10O60809 474 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 TNFP01375 233 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 JMJD7P0C870 316 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 WT1P19544 449 aaPredicted RBP16.79■□□□□ 0.28
CPSF7-225ENST00000545934 LIG3P49916 1009 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 KIAA1024LP59773 190 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 CDR2Q01850 454 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 HLTFQ14527 1009 aaKnown RBP eCLIP16.79■□□□□ 0.28
CPSF7-225ENST00000545934 CAMK4Q16566 473 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 PARP15Q460N3 678 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 RD3Q7Z3Z2 195 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 TMPRSS9Q7Z410 1059 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 SPRED1Q7Z699 444 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 PHLDB2Q86SQ0 1253 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 DNAAF5Q86Y56 855 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 SFTPA2Q8IWL1 248 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 PYROXD2Q8N2H3 581 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 PLA2G15Q8NCC3 412 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 OR1E3Q8WZA6 343 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 EXOC2Q96KP1 924 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 ZNF641Q96N77 438 aaPredicted RBP16.79■□□□□ 0.28
CPSF7-225ENST00000545934 C11orf70Q9BRQ4 267 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 SUV39H2Q9H5I1 410 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 FOXJ2Q9P0K8 574 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 DAAM1Q9Y4D1 1078 aa16.79■□□□□ 0.28
CPSF7-225ENST00000545934 HEMK1Q9Y5R4 338 aaPredicted RBP16.79■□□□□ 0.28
CPSF7-225ENST00000545934 TMEM202A6NGA9 273 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-225ENST00000545934 RASA4BC9J798 803 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 RASA4O43374 803 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 BUB1BO60566 1050 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-225ENST00000545934 HOXC4P09017 264 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-225ENST00000545934 UNGP13051 313 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-225ENST00000545934 RFC1P35251 1148 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-225ENST00000545934 NFKB2Q00653 900 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 GRM3Q14832 879 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-225ENST00000545934 C14orf28Q4W4Y0 310 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 SLFN11Q7Z7L1 901 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 ZFAND4Q86XD8 727 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 SLC30A5Q8TAD4 765 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 FUBP1Q96AE4 644 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms