RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TMEM40Q8WWA1 233 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 CEP170P1Q96L14 293 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF597Q96LX8 424 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF778Q96MU6 729 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 FERMT1Q9BQL6 677 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 EBF4Q9BQW3 602 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 NT5C1AQ9BXI3 368 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RHOBTB2Q9BYZ6 727 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 NUF2Q9BZD4 464 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 OSBPL6Q9BZF3 934 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SLC13A1Q9BZW2 595 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 C20orf27Q9GZN8 174 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 PLAC1Q9HBJ0 212 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF302Q9NR11 478 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 EIF2B3Q9NR50 452 aaKnown RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SNTG2Q9NY99 539 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ABI2Q9NYB9 513 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RBAKQ9NYW8 714 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 IPO11Q9UI26 975 aaKnown RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 USP18Q9UMW8 372 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SLC8A2Q9UPR5 921 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 HCFC2Q9Y5Z7 792 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF292O60281 2723 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 TPRP12270 2363 aaKnown RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 MYH11P35749 1972 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 KIAA1671Q9BY89 1806 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 FNDC1Q4ZHG4 1894 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 DOCK5Q9H7D0 1870 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CAPN8A6NHC0 703 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SOBPA7XYQ1 873 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 KPNA7A9QM74 516 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 HACD1B0YJ81 288 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 C2CD4DB7Z1M9 353 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 H0Y858 1186 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 H7C0C1 242 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 K7ERI5 159 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 MATN2O00339 956 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 TXNDC9O14530 226 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CYB561D2O14569 222 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 TOM1L1O75674 476 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 OR6B1O95007 311 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CSPG5O95196 566 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 H6PDO95479 791 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 C1RP00736 705 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CALCAP01258 141 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 F11P03951 625 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 MPOP05164 745 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 RALBP11234 206 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ETS2P15036 469 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 PORP16435 677 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 EPB42P16452 691 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF26P17031 533 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 PSMC3P17980 439 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ME2P23368 584 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 MIPP30301 263 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ATP5OP48047 213 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 POLD2P49005 469 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ALDH7A1P49419 539 aaKnown RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 EFNA5P52803 228 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 EPHB1P54762 984 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SNX16P57768 344 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 PSMC1P62191 440 aaKnown RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 NIPAL4Q0D2K0 466 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 MTA1Q13330 715 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SEMA5AQ13591 1074 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 UGCGQ16739 394 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 KIZQ2M2Z5 673 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SPATS1Q496A3 300 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 KCTD21Q4G0X4 260 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SLC44A4Q53GD3 710 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 C2CD6Q53TS8 623 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ATAT1Q5SQI0 421 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 PLPP4Q5VZY2 271 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 LMBRD2Q68DH5 695 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ASCL5Q7RTU5 278 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 XYLT1Q86Y38 959 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 HPS6Q86YV9 775 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CCDC60Q8IWA6 550 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 METTL25Q8N6Q8 603 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 LINC01465Q8N7H1 131 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 PLD5Q8N7P1 536 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM105Q8N8V8 129 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 TSPAN14Q8NG11 270 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF420Q8TAQ5 688 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CFAP36Q96G28 342 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SORT1Q99523 831 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 RTP3Q9BQQ7 232 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 TRIM56Q9BRZ2 755 aaKnown RBP7.73□□□□□ -1.17
CCDC60-204ENST00000539847 MECRQ9BV79 373 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 APOL6Q9BWW8 343 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CDH19Q9H159 772 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 POMKQ9H5K3 350 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 SMYD3Q9H7B4 428 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 EFCAB1Q9HAE3 211 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CYP3A43Q9HB55 503 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 BRD7Q9NPI1 651 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 XPNPEP1Q9NQW7 623 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CHST12Q9NRB3 414 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms