RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TAF6P49848 677 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 ADRM1Q16186 407 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 BTBD8Q5XKL5 378 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 PIWIL4Q7Z3Z4 852 aaKnown RBP20.42■□□□□ 0.86
TMEM260-203ENST00000539559 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 RETREG3Q86VR2 466 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 DHFR2Q86XF0 187 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 SPPL2CQ8IUH8 684 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 EXT2Q93063 718 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 TNIP3Q96KP6 325 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 SMOXQ9NWM0 555 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 ARHGEF38Q9NXL2 777 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 CIDEBQ9UHD4 219 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 TRHDEQ9UKU6 1024 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 ZSWIM8A7E2V4 1837 aa20.42■□□□□ 0.86
TMEM260-203ENST00000539559 ZSCAN9O15535 394 aaPredicted RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 CHRM3P20309 590 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 HADHAP40939 763 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 SLC12A2P55011 1212 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 LILRA4P59901 499 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 SQLEQ14534 574 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 PCID2Q5JVF3 399 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 MAML3Q96JK9 1138 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 MRPL57Q9BQC6 102 aaKnown RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 COLEC11Q9BWP8 271 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 MUC3BQ9H195 1237 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 SOX17Q9H6I2 414 aaPredicted RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 CLK4Q9HAZ1 481 aaKnown RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 DERAQ9Y315 318 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 NRP2O60462 931 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 SRP72O76094 671 aaKnown RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 MAPK10P53779 464 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 CDH13P55290 713 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 CAPRIN1Q14444 709 aaKnown RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 PCSK7Q16549 785 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 DENND5AQ6IQ26 1287 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 CYHR1Q6ZMK1 362 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 ARRDC4Q8NCT1 418 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 MIPOL1Q8TD10 442 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 ANKRD49Q8WVL7 239 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 WDCPQ9H6R7 721 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 PIN4Q9Y237 131 aaKnown RBP20.41■□□□□ 0.86
TMEM260-203ENST00000539559 GMEB1Q9Y692 573 aa20.41■□□□□ 0.86
TMEM260-203ENST00000539559 CYP2C9P11712 490 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 EPHX4Q8IUS5 362 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FUNDC1Q8IVP5 155 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 OFCC1Q8IZS5 231 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ISOC1Q96CN7 298 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FAM210AQ96ND0 272 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ADAMTS10Q9H324 1103 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 PPP6CO00743 305 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 DLGAP1O14490 977 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 CPB1P15086 417 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 KCNC1P48547 511 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 DAOAP59103 153 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FAM83EQ2M2I3 478 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 TTC33Q6PID6 262 aaPredicted RBP20.4■□□□□ 0.86
TMEM260-203ENST00000539559 CHST15Q7LFX5 561 aaPredicted RBP20.4■□□□□ 0.86
TMEM260-203ENST00000539559 TMEM40Q8WWA1 233 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 RNF34Q969K3 372 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 PBXIP1Q96AQ6 731 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 C12orf43Q96C57 262 aaKnown RBP20.4■□□□□ 0.86
TMEM260-203ENST00000539559 TINF2Q9BSI4 451 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ANKRD60Q9BZ19 345 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 TMEM181Q9P2C4 612 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FBXO5Q9UKT4 447 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ZNF711Q9Y462 761 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 BOLA2-SMG1P6H3BVE0 249 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 NR5A2O00482 541 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ALDOCP09972 364 aaKnown RBP20.4■□□□□ 0.86
TMEM260-203ENST00000539559 COL6A2P12110 1019 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 CD151P48509 253 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 NOTUMQ6P988 496 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ELMSAN1Q6PJG2 1045 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FAM35AQ86V20 835 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FNDC8Q8TC99 324 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 TFAP2CQ92754 450 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 FBXL20Q96IG2 436 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 SMOQ99835 787 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ABHD16BQ9H3Z7 469 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 MEAF6Q9HAF1 191 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 CRTAC1Q9NQ79 661 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 GDAP2Q9NXN4 497 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 NSMCE4AQ9NXX6 385 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 IPO11Q9UI26 975 aaKnown RBP20.4■□□□□ 0.86
TMEM260-203ENST00000539559 ZNF510Q9Y2H8 683 aa20.4■□□□□ 0.86
TMEM260-203ENST00000539559 TSC2P49815 1807 aa20.39■□□□□ 0.86
TMEM260-203ENST00000539559 NCAM2O15394 837 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 MT-ND1P03886 318 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 MAP7D1Q3KQU3 841 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 TECRLQ5HYJ1 363 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 TBCELQ5QJ74 424 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 GPR141Q7Z602 305 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 ZFP42Q96MM3 310 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 DSEQ9UL01 958 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 NRCAMQ92823 1304 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 MYBPHLA2RUH7 354 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 IPO13O94829 963 aaKnown RBP20.39■□□□□ 0.85
TMEM260-203ENST00000539559 SUPT7LO94864 414 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 PSMD8P48556 350 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms