RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 TECRLQ5HYJ1 363 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 HECTD2Q5U5R9 776 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 PGM2L1Q6PCE3 622 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 RIPOR1Q6ZS17 1223 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CFAP52Q8N1V2 620 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 KDM1BQ8NB78 822 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 OR6P1Q8NGX9 317 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 AGR3Q8TD06 166 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 ACTRT2Q8TDY3 377 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 IFT43Q96FT9 208 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CCDC28BQ9BUN5 200 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 WDR55Q9H6Y2 383 aaPredicted RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 NCKIPSDQ9NZQ3 722 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 MARCH4Q9P2E8 410 aaPredicted RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 KCTD3Q9Y597 815 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CHD5Q8TDI0 1954 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 A0A0D9SEW6 157 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF840PA6NDX5 716 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC22A2O15244 555 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CCNT2O60583 730 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 TBX10O75333 385 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 GJB3O75712 270 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 RBP1P09455 135 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 ELF1P32519 619 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC26A3P40879 764 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC11A2P49281 568 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 GNA12Q03113 381 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 TAF11Q15544 211 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 USP41Q3LFD5 358 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 TRIM67Q6ZTA4 783 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 MYLK4Q86YV6 388 aaPredicted RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CPSF7Q8N684 471 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CCNYL1Q8N7R7 359 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 GPR150Q8NGU9 434 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 SCG3Q8WXD2 468 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CCDC126Q96EE4 140 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 MGME1Q9BQP7 344 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 RTKNQ9BST9 563 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 UNKQ9C0B0 810 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 LOC100653049A0A140TA62 436 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 KRT34O76011 436 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 GJB5O95377 273 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 SERPINF2P08697 491 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 CCDC166P0CW27 439 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 HMGA1P17096 107 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ADSLP30566 484 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 OR1D2P34982 312 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 VHLP40337 213 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ALDH7A1P49419 539 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ARHGEF6Q15052 776 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ACAP2Q15057 778 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 RALGPS1Q5JS13 557 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 HECTD3Q5T447 861 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 KLC3Q6P597 504 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 FRMD7Q6ZUT3 714 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ACAD11Q709F0 780 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 BBS5Q8N3I7 341 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 OR7D4Q8NG98 312 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 OR52K2Q8NGK3 314 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 NAF1Q96HR8 494 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 TBATAQ96M53 351 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF512Q96ME7 567 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 TRIB3Q96RU7 358 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 NUF2Q9BZD4 464 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 POMKQ9H5K3 350 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF385DQ9H6B1 395 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 SEPT3Q9UH03 358 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ZFP37Q9Y6Q3 630 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 CCL22O00626 93 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 COCHO43405 550 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 RPP40O75818 363 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 NDST3O95803 873 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 HOXB8P17481 243 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ITGAXP20702 1163 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 EPHA3P29320 983 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 C1orf146Q5VVC0 180 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 LDB1Q86U70 411 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 PNPLA1Q8N8W4 532 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ANKRD49Q8WVL7 239 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 NRG4Q8WWG1 115 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 N4BP2L2Q92802 583 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 PLD4Q96BZ4 506 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 SGF29Q96ES7 293 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 SCLYQ96I15 445 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 LENG8Q96PV6 779 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 VN1R3Q9BXE9 311 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 OSBPL1AQ9BXW6 950 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 SHCBP1LQ9BZQ2 653 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 HSFX1Q9UBD0 423 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms