RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 GLOD5A6NK44 160 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 TSPY2A6NKD2 308 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 LINC01548A6NM66 108 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 CTDSP2O14595 271 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 UGDHO60701 494 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 NDUFS3O75489 264 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 TPPPO94811 219 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 LATS1O95835 1130 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 RPN1P04843 607 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 LCKP06239 509 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 TSPY3P0CV98 308 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 TSPY8P0CW00 308 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 AGAP20933 346 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 HOXA13P31271 388 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 DCTDP32321 178 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 CAMPP49913 170 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 CLCN5P51795 746 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 MRPL12P52815 198 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 TUBA4AP68366 448 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 HSF1Q00613 529 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 TSPY1Q01534 308 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 ZNF268Q14587 947 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 SHBQ15464 509 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 KYNUQ16719 465 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 TMEM266Q2M3C6 531 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 CDONQ4KMG0 1287 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 MIDNQ504T8 468 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 SOWAHCQ53LP3 525 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 ESCO2Q56NI9 601 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 ALG10Q5BKT4 473 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 SGO1Q5FBB7 561 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 ALG10BQ5I7T1 473 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 ERMARDQ5T6L9 678 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 MEX3CQ5U5Q3 659 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 GPR139Q6DWJ6 353 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 FBXO46Q6PJ61 603 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 ZNF782Q6ZMW2 699 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 SEPT14Q6ZU15 432 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 KBTBD6Q86V97 674 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 ARHGEF25Q86VW2 580 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 LURAP1LQ8IV03 231 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 ADGRF4Q8IZF3 695 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 LRRC57Q8N9N7 239 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 HJURPQ8NCD3 748 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 GJC3Q8NFK1 279 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 GABPB2Q8TAK5 448 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 BCAS4Q8TDM0 211 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 PRPF31Q8WWY3 499 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 OR2A14Q96R47 310 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 SH2D3AQ9BRG2 576 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 OR10A4Q9H209 315 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 RANGRFQ9HD47 186 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 PNRC2Q9NPJ4 139 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 PDGFCQ9NRA1 345 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 RNF146Q9NTX7 359 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 OGFRQ9NZT2 677 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 C5AR2Q9P296 337 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 MARCH4Q9P2E8 410 aaPredicted RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 KLHL13Q9P2N7 655 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 SEL1LQ9UBV2 794 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 SEC63Q9UGP8 760 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 NDRG3Q9UGV2 375 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 PTRH2Q9Y3E5 179 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 LSM4Q9Y4Z0 139 aaKnown RBP3.09□□□□□ -1.91
CD44-234ENST00000531873 A0A096LPK6 155 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 TRBV5-3A0A0A0MS03 114 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 KIR2DS5A0A0G2JLQ3 304 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 FAM237AA0A1B0GTK4 181 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 WIPF3A6NGB9 483 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 KIR2DS3K7RE56 304 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 PCNAP12004 261 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 ETFAP13804 333 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 BMP5P22003 454 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 PON1P27169 355 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 TNFSF8P32971 234 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 CIITAP33076 1130 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 SLC16A2P36021 539 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 GPR12P47775 334 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 GALCP54803 685 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 MFAP4P55083 255 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 TNFAIP1Q13829 316 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 DRAP1Q14919 205 aaPredicted RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 NTRK2Q16620 822 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 PCGF3Q3KNV8 242 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 PLEKHO1Q53GL0 409 aaPredicted RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 TTC39AQ5SRH9 613 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 C6orf141Q5SZD1 244 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 ADALQ6DHV7 355 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 ISM2Q6H9L7 571 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 TMEM71Q6P5X7 295 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 CPLX2Q6PUV4 134 aaKnown RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 FAM57BQ71RH2 274 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 PLPPR4Q7Z2D5 763 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 IGFN1Q86VF2 1251 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 GPSM1Q86YR5 675 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 TMC8Q8IU68 726 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 DENND6AQ8IWF6 608 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 ZDHHC23Q8IYP9 409 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 SLC25A41Q8N5S1 370 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 KDM1BQ8NB78 822 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms