RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 C2CD4BA6NLJ0 364 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 PIGNO95427 931 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 IGSF6O95976 241 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 ALPIP09923 528 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 UCHL3P15374 230 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 SDC4P31431 198 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 PEX5P50542 639 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 INHBCP55103 352 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 HDAC4P56524 1084 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 RHOAP61586 193 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 RAD51Q06609 339 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 EIF3IQ13347 325 aaKnown RBP17.48■□□□□ 0.39
PKP3-208ENST00000531857 INPP5AQ14642 412 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 USP53Q70EK8 1073 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 PYROXD2Q8N2H3 581 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 MLKLQ8NB16 471 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 EXOC2Q96KP1 924 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 TRIM4Q9C037 500 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 STRADBQ9C0K7 418 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 LRRN3Q9H3W5 708 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 NOCTQ9UK39 431 aaKnown RBP17.48■□□□□ 0.39
PKP3-208ENST00000531857 ACSL6Q9UKU0 697 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 MFHAS1Q9Y4C4 1052 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 OR1A2Q9Y585 309 aa17.48■□□□□ 0.39
PKP3-208ENST00000531857 ZSCAN5CA6NGD5 496 aaPredicted RBP17.47■□□□□ 0.39
PKP3-208ENST00000531857 TMEM110-MUSTN1A8MSY1 372 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 F8VZ95 297 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 ARHGAP6O43182 974 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 RASGRP1O95267 797 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 MMP8P22894 467 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 CDC25BP30305 580 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 CCKBRP32239 447 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 SRP54P61011 504 aaKnown RBP17.47■□□□□ 0.39
PKP3-208ENST00000531857 NFKB2Q00653 900 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 NFATC4Q14934 902 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 SFTPA2Q8IWL1 248 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 Q8N9G6 341 aaPredicted RBP17.47■□□□□ 0.39
PKP3-208ENST00000531857 SLC30A5Q8TAD4 765 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
PKP3-208ENST00000531857 EXTL1Q92935 676 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 SGF29Q96ES7 293 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 APOOQ9BUR5 198 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 LHX3Q9UBR4 397 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 PISDQ9UG56 409 aa17.47■□□□□ 0.39
PKP3-208ENST00000531857 UBR5O95071 2799 aaPredicted RBP17.46■□□□□ 0.39
PKP3-208ENST00000531857 TMX2-CTNND1H3BSU7 103 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 CYP1A1P04798 512 aaPredicted RBP17.46■□□□□ 0.39
PKP3-208ENST00000531857 PTMAP06454 111 aaKnown RBP17.46■□□□□ 0.39
PKP3-208ENST00000531857 CHRNB2P17787 502 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 ITIH1P19827 911 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 HTR1BP28222 390 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 PTPN9P43378 593 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 IQCB1Q15051 598 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 CYTH1Q15438 398 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 INO80DQ53TQ3 878 aaPredicted RBP17.46■□□□□ 0.39
PKP3-208ENST00000531857 STRADAQ7RTN6 431 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 GKN2Q86XP6 184 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 FAM114A1Q8IWE2 563 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 RTL3Q8N8U3 475 aaKnown RBP17.46■□□□□ 0.39
PKP3-208ENST00000531857 FAM172AQ8WUF8 416 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 HMCESQ96FZ2 354 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 PDXPQ96GD0 296 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 STK33Q9BYT3 514 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 FAM117AQ9C073 453 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 PCDH12Q9NPG4 1184 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 KLQ9UEF7 1012 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 LOXL2Q9Y4K0 774 aa17.46■□□□□ 0.39
PKP3-208ENST00000531857 SDK2Q58EX2 2172 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 PES1O00541 588 aaKnown RBP17.45■□□□□ 0.38
PKP3-208ENST00000531857 NVLO15381 856 aaKnown RBP17.45■□□□□ 0.38
PKP3-208ENST00000531857 GFPT2O94808 682 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 PRKCGP05129 697 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 PCCBP05166 539 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 JMJD7P0C870 316 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 LIPCP11150 499 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 XPAP23025 273 aaPredicted RBP17.45■□□□□ 0.38
PKP3-208ENST00000531857 ETV5P41161 510 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 FMO1Q01740 532 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 ELP6Q0PNE2 266 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 UGP2Q16851 508 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 VASH2Q86V25 355 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 ZSWIM9Q86XI8 627 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 CCNJLQ8IV13 435 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 PLA2G15Q8NCC3 412 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 GPR156Q8NFN8 814 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 CASKIN2Q8WXE0 1202 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 TMEM74Q96NL1 305 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 RBM15Q96T37 977 aaKnown RBP eCLIP17.45■□□□□ 0.385e-6■■□□□ 11.5
PKP3-208ENST00000531857 IL17BQ9UHF5 180 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 DAAM1Q9Y4D1 1078 aa17.45■□□□□ 0.38
PKP3-208ENST00000531857 HEMK1Q9Y5R4 338 aaPredicted RBP17.45■□□□□ 0.38
PKP3-208ENST00000531857 TLN1Q9Y490 2541 aaKnown RBP17.44■□□□□ 0.38
PKP3-208ENST00000531857 PRAMEF33A0A0G2JMD5 474 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 TSPAN11A1L157 253 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 ESPNB1AK53 854 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 RASA4BC9J798 803 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 RASA4O43374 803 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 BUB1BO60566 1050 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms