RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 EIF2B5Q13144 721 aaKnown RBP12.15□□□□□ -0.46
COPB1-206ENST00000529210 DNAJC3Q13217 504 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
COPB1-206ENST00000529210 NFKBIBQ15653 356 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 TPRG1LQ5T0D9 272 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 ALG1LQ6GMV1 187 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 MACC1Q6ZN28 852 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 CAMK1DQ8IU85 385 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 TEX26Q8N6G2 289 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
COPB1-206ENST00000529210 ZNF548Q8NEK5 533 aaPredicted RBP12.15□□□□□ -0.46
COPB1-206ENST00000529210 HSPH1Q92598 858 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 BTBD6Q96KE9 485 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 NSMCE3Q96MG7 304 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 NUDCD1Q96RS6 583 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 ZNF670Q9BS34 389 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 TSPY26PQ9H489 355 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 ABHD10Q9NUJ1 306 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 UCKL1Q9NWZ5 548 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 KLF15Q9UIH9 416 aa12.15□□□□□ -0.46
COPB1-206ENST00000529210 LRP4O75096 1905 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 LY6G6EA0A0G2JKS1 128 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 SRRM3A6NNA2 597 aaPredicted RBP12.14□□□□□ -0.47
COPB1-206ENST00000529210 TMEM110-MUSTN1A8MSY1 372 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 ZNF487B1APH4 448 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 TAF4O00268 1085 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 MFAP3LO75121 409 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 MTA2O94776 668 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 GP1BAP07359 652 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 C6P13671 934 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 ITIH2P19823 946 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 HNF1BP35680 557 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 E2F1Q01094 437 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 DPYSL3Q14195 570 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 LRRC14Q15048 493 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 PAFAH1B3Q15102 231 aaKnown RBP12.14□□□□□ -0.47
COPB1-206ENST00000529210 PDK2Q15119 407 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 TCEAL1Q15170 157 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 WSCD2Q2TBF2 565 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 HS1BP3Q53T59 392 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 LRRC73Q5JTD7 316 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 DPPA4Q7L190 304 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 BBS5Q8N3I7 341 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 SDR16C5Q8N3Y7 309 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
COPB1-206ENST00000529210 CCDC86Q9H6F5 360 aaKnown RBP12.14□□□□□ -0.47
COPB1-206ENST00000529210 MBNL1Q9NR56 388 aaKnown RBP12.14□□□□□ -0.47
COPB1-206ENST00000529210 KCTD5Q9NXV2 234 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 NCKIPSDQ9NZQ3 722 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 AMACRQ9UHK6 382 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 PPIL1Q9Y3C6 166 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 U3KQA8 63 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 ACACAQ13085 2346 aa12.14□□□□□ -0.47
COPB1-206ENST00000529210 K7ESM1 405 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 AQP9O43315 295 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 KRT7P08729 469 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 HOXC4P09017 264 aaPredicted RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 TPM1P09493 284 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 ARHGAP25P42331 645 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 LIG3P49916 1009 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 SCNN1BP51168 640 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 DUSP3P51452 185 aaPredicted RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 THOP1P52888 689 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 GALNT2Q10471 571 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 RALGDSQ12967 914 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 TBX2Q13207 712 aaPredicted RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 MTM1Q13496 603 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 ZNF235Q14590 738 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 IRF4Q15306 451 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 CFAP58Q5T655 872 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 LIPIQ6XZB0 460 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 MAP7D3Q8IWC1 876 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 CBARPQ8N350 705 aaPredicted RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 PGBD5Q8N414 524 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 ATPAF2Q8N5M1 289 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 PCDH19Q8TAB3 1148 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 MAML1Q92585 1016 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 APOLD1Q96LR9 279 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 TSGA13Q96PP4 275 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 WRAP53Q9BUR4 548 aaKnown RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 PACSIN1Q9BY11 444 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 EVA1BQ9NVM1 165 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 ZNHIT6Q9NWK9 470 aaKnown RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 CTTNBP2NLQ9P2B4 639 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 INTUQ9ULD6 942 aa12.13□□□□□ -0.47
COPB1-206ENST00000529210 PNMA8BQ9ULN7 279 aaPredicted RBP12.13□□□□□ -0.47
COPB1-206ENST00000529210 APC2O95996 2303 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 DSPP15924 2871 aaKnown RBP12.12□□□□□ -0.47
COPB1-206ENST00000529210 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 MYLKQ15746 1914 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 TRABD2BA6NFA1 517 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 LMO7DNF2Z398 122 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms