RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	CTBP1	Q13363	440 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	KPNB1	Q14974	876 aa	Known RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	ACSBG2	Q5FVE4	666 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	RALGPS1	Q5JS13	557 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	SIRPB2	Q5JXA9	342 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	RASIP1	Q5U651	963 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	SDHAF4	Q5VUM1	108 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	NAPRT	Q6XQN6	538 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	ZNF354C	Q86Y25	554 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	MIB1	Q86YT6	1006 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	APLF	Q8IW19	511 aa	Predicted RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	GPATCH11	Q8N954	259 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	RP9	Q8TA86	221 aa	Known RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	IGSF8	Q969P0	613 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	TCF12	Q99081	682 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	OMD	Q99983	421 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	MGME1	Q9BQP7	344 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	PDF	Q9HBH1	243 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	INTS10	Q9NVR2	710 aa	Known RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	UXT	Q9UBK9	157 aa	Predicted RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	AFF4	Q9UHB7	1163 aa	Known RBP	10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	VPS28	Q9UK41	221 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	CDYL	Q9Y232	598 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	VWA7	Q9Y334	891 aa		10.28	□□□□□ -0.76
PGAP2-231	ENST00000528216	MKI67	P46013	3256 aa	Known RBP	10.27	□□□□□ -0.76
PGAP2-231	ENST00000528216	TK2	O00142	265 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	DLX3	O60479	287 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	RPP40	O75818	363 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	GLP2R	O95838	553 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	EFEMP2	O95967	443 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	SBK3	P0C264	359 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	ATXN1L	P0C7T5	689 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	COX4I1	P13073	169 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	NCF2	P19878	526 aa	Predicted RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	ARRB2	P32121	409 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	PTDSS1	P48651	473 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	NAGLU	P54802	743 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	NFKB2	Q00653	900 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	DSC2	Q02487	901 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	GNA12	Q03113	381 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	DUSP4	Q13115	394 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	KLF10	Q13118	480 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	UBAP2L	Q14157	1087 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	RCN1	Q15293	331 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	TAF11	Q15544	211 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	PCSK7	Q16549	785 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	ACCSL	Q4AC99	568 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	KHDC1	Q4VXA5	237 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	ARL13A	Q5H913	290 aa	Predicted RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	TECRL	Q5HYJ1	363 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	HECTD3	Q5T447	861 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	RFWD3	Q6PCD5	774 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	C16orf89	Q6UX73	402 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	RNF19B	Q6ZMZ0	732 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	GPR65	Q8IYL9	337 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC25A41	Q8N5S1	370 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	OR13J1	Q8NGT2	312 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	NXNL1	Q96CM4	212 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	TRMT2B	Q96GJ1	504 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	UBXN10	Q96LJ8	280 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	MYRFL	Q96LU7	910 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	PSKH2	Q96QS6	385 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	SEMA3C	Q99985	751 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	C19orf43	Q9BQ61	176 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	THTPA	Q9BU02	230 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	VCX3B	Q9H321	246 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	MRPL40	Q9NQ50	206 aa	Known RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	STK39	Q9UEW8	545 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC2A6	Q9UGQ3	507 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	MYLK	Q15746	1914 aa		10.27	□□□□□ -0.77
PGAP2-231	ENST00000528216	RGSL1	A5PLK6	1076 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TRIM43B	A6NCK2	446 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	GOLGA8T	H3BQL2	631 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	NVL	O15381	856 aa	Known RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	LDB2	O43679	373 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	KDELR3	O43731	214 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	WISP3	O95389	354 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	RAG1	P15918	1043 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	ATP6V1C1	P21283	382 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CD9	P21926	228 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	PPARG	P37231	505 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	ALDH7A1	P49419	539 aa	Known RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	SUOX	P51687	545 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	ARPP19	P56211	112 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	MAPRE2	Q15555	327 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	PGM2L1	Q6PCE3	622 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	MYLK4	Q86YV6	388 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CEP97	Q8IW35	865 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	HOMEZ	Q8IX15	550 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	LGI2	Q8N0V4	545 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	ACVR1C	Q8NER5	493 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	FBXO22	Q8NEZ5	403 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	NAF1	Q96HR8	494 aa	Known RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	IGSF5	Q9NSI5	407 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TRPM5	Q9NZQ8	1165 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CPSF2	Q9P2I0	782 aa	Known RBP	10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms