RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HDAC4P56524 1084 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 ELP6Q0PNE2 266 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 CCNJLQ8IV13 435 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 SFTPA2Q8IWL1 248 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 STK33Q9BYT3 514 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 RETREG1Q9H6L5 497 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 PCDH12Q9NPG4 1184 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 DAAM1Q9Y4D1 1078 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 C2CD4BA6NLJ0 364 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 FAM87AP0C7U9 286 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 LIG3P49916 1009 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 MAPK10P53779 464 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 MANEAQ5SRI9 462 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 CFAP58Q5T655 872 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 SCYL2Q6P3W7 929 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 STRADAQ7RTN6 431 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 TAF8Q7Z7C8 310 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 ZFAND4Q86XD8 727 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 RTL3Q8N8U3 475 aaKnown RBP26.14■■□□□ 1.78
PVT1-219ENST00000523427 FAM46DQ8NEK8 389 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 PDXPQ96GD0 296 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 WDR92Q96MX6 357 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 MFHAS1Q9Y4C4 1052 aa26.14■■□□□ 1.78
PVT1-219ENST00000523427 UNC13CQ8NB66 2214 aa26.14■■□□□ 1.77
PVT1-219ENST00000523427 RASA4BC9J798 803 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 RASA4O43374 803 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 CREB3O43889 395 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 MMP8P22894 467 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 CYTH1Q15438 398 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 SLFN11Q7Z7L1 901 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 SUV39H2Q9H5I1 410 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 LHX3Q9UBR4 397 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 IL17BQ9UHF5 180 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 MOSPD1Q9UJG1 213 aa26.13■■□□□ 1.77
PVT1-219ENST00000523427 NOCTQ9UK39 431 aaKnown RBP26.13■■□□□ 1.77
PVT1-219ENST00000523427 PRAMEF33A0A0G2JMD5 474 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 PRAMEF10O60809 474 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 LIPCP11150 499 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 KRT3P12035 628 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 CCKBRP32239 447 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 ETV5P41161 510 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 PTPN9P43378 593 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 CSRP3P50461 194 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 CYP4F2P78329 520 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 UGP2Q16851 508 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 INO80DQ53TQ3 878 aaPredicted RBP26.12■■□□□ 1.77
PVT1-219ENST00000523427 ERAP2Q6P179 960 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 PAF1Q8N7H5 531 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 PLA2G15Q8NCC3 412 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 ATL2Q8NHH9 583 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 CASKIN2Q8WXE0 1202 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 USP7Q93009 1102 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 MRPL40Q9NQ50 206 aaKnown RBP26.12■■□□□ 1.77
PVT1-219ENST00000523427 SEPT10Q9P0V9 454 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 RNF215Q9Y6U7 377 aa26.12■■□□□ 1.77
PVT1-219ENST00000523427 CHD5Q8TDI0 1954 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 B4DGG1 531 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 CYP1A1P04798 512 aaPredicted RBP26.11■■□□□ 1.77
PVT1-219ENST00000523427 CHRNB2P17787 502 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 RFC1P35251 1148 aaPredicted RBP26.11■■□□□ 1.77
PVT1-219ENST00000523427 FMO1Q01740 532 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 CDR2Q01850 454 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 PHF19Q5T6S3 580 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 GPR156Q8NFN8 814 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 OR6C4Q8NGE1 309 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 JPH3Q8WXH2 748 aaPredicted RBP26.11■■□□□ 1.77
PVT1-219ENST00000523427 OR1E3Q8WZA6 343 aa26.11■■□□□ 1.77
PVT1-219ENST00000523427 UBA2Q9UBT2 640 aaPredicted RBP26.11■■□□□ 1.77
PVT1-219ENST00000523427 NVLO15381 856 aaKnown RBP26.1■■□□□ 1.77
PVT1-219ENST00000523427 GPD1P21695 349 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 SUOXP51687 545 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 ARHGEF7Q14155 803 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 EFHC2Q5JST6 749 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 ZNF677Q86XU0 584 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 CAMK1DQ8IU85 385 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 CENPIQ92674 756 aaPredicted RBP26.1■■□□□ 1.77
PVT1-219ENST00000523427 NTAN1Q96AB6 310 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 RBM15Q96T37 977 aaKnown RBP eCLIP26.1■■□□□ 1.771e-8■■■■□ 25.4
PVT1-219ENST00000523427 SELENOOQ9BVL4 669 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 DPEP2Q9H4A9 486 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 SUDS3Q9H7L9 328 aaPredicted RBP26.1■■□□□ 1.77
PVT1-219ENST00000523427 SAMSN1Q9NSI8 373 aaKnown RBP26.1■■□□□ 1.77
PVT1-219ENST00000523427 TAB2Q9NYJ8 693 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 FOXJ2Q9P0K8 574 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 LRIT1Q9P2V4 623 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 PCDHB11Q9Y5F2 797 aa26.1■■□□□ 1.77
PVT1-219ENST00000523427 TMEM202A6NGA9 273 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 GLB1P16278 677 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 KLK7P49862 253 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 SERINC3Q13530 473 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 DPCR1Q3MIW9 517 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 WDR59Q6PJI9 974 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 ZSWIM9Q86XI8 627 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 DNAAF5Q86Y56 855 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 FGF22Q9HCT0 170 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 NLRC4Q9NPP4 1024 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 ACSL6Q9UKU0 697 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 PCDHGA4Q9Y5G9 962 aa26.09■■□□□ 1.77
PVT1-219ENST00000523427 BOD1L1Q8NFC6 3051 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 CACNB4O00305 520 aaPredicted RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms