RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 STRA6Q9BX79 667 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 ST6GALNAC4Q9H4F1 302 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 SMYD3Q9H7B4 428 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 PCDH18Q9HCL0 1135 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 DMAP1Q9NPF5 467 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-211ENST00000522802 PRSS16Q9NQE7 514 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 THSD1Q9NS62 852 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 INTS13Q9NVM9 706 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 CNOT6Q9ULM6 557 aaKnown RBP6.58□□□□□ -1.36
VPS13B-211ENST00000522802 KCTD3Q9Y597 815 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 ATP23Q9Y6H3 246 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 ICE1Q9Y2F5 2266 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 C2CD3Q4AC94 2353 aa6.58□□□□□ -1.36
VPS13B-211ENST00000522802 A8MXQ7 604 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 FFAR2O15552 330 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 TACC1O75410 805 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 TNNC2P02585 160 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 AFPP02771 609 aaKnown RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 HMBSP08397 361 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 CCDC130P13994 396 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 CD38P28907 300 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ATP5C1P36542 298 aaKnown RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 LIMS1P48059 325 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 GALCP54803 685 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 PPP2CBP62714 309 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 PPP2CAP67775 309 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 GOLGA8FQ08AF8 430 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 GOLGA8DPQ0D2H9 430 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 POSTNQ15063 836 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ANKRD1Q15327 319 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ZSCAN23Q3MJ62 389 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 TTC31Q49AM3 519 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 C10orf120Q5SQS8 335 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ZNF720Q7Z2F6 126 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 KIF18BQ86Y91 864 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 CBWD2Q8IUF1 395 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 FUKQ8N0W3 1084 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 LSMEM2Q8N112 164 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 PPM1KQ8N3J5 372 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 FBXO18Q8NFZ0 1043 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 RAD54LQ92698 747 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 SMARCD1Q96GM5 515 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 PRR11Q96HE9 360 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ANKRD36BP1Q96IX9 119 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 SERAC1Q96JX3 654 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 SYT3Q9BQG1 590 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 MED10Q9BTT4 135 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 PABPC3Q9H361 631 aaKnown RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 PCIF1Q9H4Z3 704 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 SGK2Q9HBY8 427 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 TLR8Q9NR97 1041 aaKnown RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 UCKL1Q9NWZ5 548 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 TBC1D7Q9P0N9 293 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 B4GALT6Q9UBX8 382 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 HMGXB4Q9UGU5 601 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 MAN2B2Q9Y2E5 1009 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 CSMD1Q96PZ7 3565 aa6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ZFC3H1O60293 1989 aaKnown RBP6.57□□□□□ -1.36
VPS13B-211ENST00000522802 ATP8B3O60423 1300 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 TDRD6O60522 2096 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 OTOGQ6ZRI0 2925 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 LY6G6EA0A0G2JKS1 128 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 SLC12A8A0AV02 714 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CDRT15L2A8MXV6 281 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 TLR4O00206 839 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CASC3O15234 703 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 MID1O15344 667 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 EPB41L2O43491 1005 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 MYCLP1P12525 358 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 RARGP13631 454 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 PI3P19957 117 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 HOXD9P28356 352 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 HLA-FP30511 346 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CORO1AP31146 461 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ABCD1P33897 745 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 RXRGP48443 463 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 MASP1P48740 699 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 NEK4P51957 841 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 MAP3K7CLP57077 242 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 TNNC1P63316 161 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 E2F1Q01094 437 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ZBTB16Q05516 673 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ARL13BQ3SXY8 428 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ZNF385BQ569K4 471 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 L1TD1Q5T7N2 865 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ZNF776Q68DI1 518 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 SCARA5Q6ZMJ2 495 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CENPQQ7L2Z9 268 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ADIPOR2Q86V24 386 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CCDC83Q8IWF9 413 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 AHI1Q8N157 1196 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 SLC25A45Q8N413 288 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CHST14Q8NCH0 376 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 GANCQ8TET4 914 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms