RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 URODP06132 367 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 STAG3L1P0CL83 205 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SMIM18P0DKX4 95 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 INSRRP14616 1297 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP3A5P20815 502 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 HLA-FP30511 346 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ARSEP51690 589 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 YWHAEP62258 255 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 EEF1A1P68104 462 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RPP30P78346 268 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 GAD2Q05329 585 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 EEF1A2Q05639 463 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC10A6Q3KNW5 377 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MDH1BQ5I0G3 518 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 EEF1A1P5Q5VTE0 462 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RWDD4Q6NW29 188 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 USP50Q70EL3 339 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ARMCX2Q7L311 632 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 KRT74Q7RTS7 529 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 METTL25Q8N6Q8 603 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 EMC1Q8N766 993 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 VANGL1Q8TAA9 524 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF566Q969W8 418 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CPB2Q96IY4 423 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC29A1Q99808 456 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 FDXACB1Q9BRP7 624 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ZPBPQ9BS86 351 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 FRMD8Q9BZ67 464 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TINAGL1Q9GZM7 467 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CXCL16Q9H2A7 254 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MROH8Q9H579 483 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RPF1Q9H9Y2 349 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ERAP1Q9NZ08 941 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 BAG5Q9UL15 447 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 NAALADL1Q9UQQ1 740 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SCN4AP35499 1836 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 DYNC1LI2O43237 492 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM127O75204 238 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 KRT19P08727 400 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 KRT3P12035 628 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 BMPR1AP36894 532 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MAGEA11P43364 429 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ATP6V0D1P61421 351 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 POU6F1Q14863 301 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TAF5Q15542 800 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RAB6CQ53S08 254 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 AADACL4Q5VUY2 407 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MAP1SQ66K74 1059 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 NANOGP8Q6NSW7 305 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CGB2Q6NT52 195 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RFWD3Q6PCD5 774 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 KDELC1Q6UW63 502 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 C4orf50Q6ZRC1 276 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ILDR2Q71H61 639 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 GSTA5Q7RTV2 222 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SRRM1Q8IYB3 904 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 LEMD2Q8NC56 503 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF540Q8NDQ6 660 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM43Q96BQ3 446 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MCRS1Q96EZ8 462 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CCDC120Q96HB5 630 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CNPY3Q9BT09 278 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 HOXD1Q9GZZ0 328 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RAB6CQ9H0N0 254 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP4F12Q9HCS2 524 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PRMT7Q9NVM4 692 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 A6NJY4 79 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CDH16O75309 829 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 BANF1O75531 89 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SULT1C4O75897 302 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MICAL2O94851 1124 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TP53P04637 393 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CHRM5P08912 532 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP2C8P10632 490 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 MCF2P10911 925 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PCSK2P16519 638 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ARF4P18085 180 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 KDELR1P24390 212 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PSMA2P25787 234 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PTPN11Q06124 597 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 GPS1Q13098 491 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF667Q5HYK9 610 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 GPR142Q7Z601 462 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TERB1Q8NA31 727 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 LRRC20Q8TCA0 184 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 RAET1EQ8TD07 263 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PIWIL1Q96J94 861 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 B3GALT6Q96L58 329 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PEBP4Q96S96 227 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PPP1R16BQ96T49 567 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 C16orf70Q9BSU1 422 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 PCDH9Q9HC56 1237 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 NPDC1Q9NQX5 325 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 EIF2B4Q9UI10 523 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC9B1P1A6NJY1 282 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms