RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 FIZ1Q96SL8 496 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 FAM126AQ9BYI3 521 aaPredicted RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 AAASQ9NRG9 546 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 H2AFY2Q9P0M6 372 aaPredicted RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 FETUBQ9UGM5 382 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 PCDHB12Q9Y5F1 795 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 MYH11P35749 1972 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 NEMP2A6NFY4 417 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 NT5C1B-RDH14C9J2C7 533 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 PPEF2O14830 753 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 HOXA2O43364 376 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 ITM2AO43736 263 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 TLR5O60602 858 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 CNOT3O75175 753 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 RPL9P32969 192 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 EPHB3P54753 998 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 LSM3P62310 102 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 RPL38P63173 70 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 ENPEPQ07075 957 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 CAMK2GQ13555 558 aaPredicted RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 PRKD1Q15139 912 aaPredicted RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 CPSF6Q16630 551 aaKnown RBP eCLIP8.09□□□□□ -1.11
NEK1-208ENST00000512193 GPR107Q5VW38 600 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 SYPL2Q5VXT5 272 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 ARHGAP36Q6ZRI8 547 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 GPRIN3Q6ZVF9 776 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 LRRC49Q8IUZ0 686 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 HERC6Q8IVU3 1022 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 STX19Q8N4C7 294 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 OR4L1Q8NH43 312 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 WDR60Q8WVS4 1066 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 PCED1BQ96HM7 432 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 TCF12Q99081 682 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 ABCG8Q9H221 673 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 AGO3Q9H9G7 860 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 KDM3BQ7LBC6 1761 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 ARFGEF2Q9Y6D5 1785 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 MYH15Q9Y2K3 1946 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 SMIM35A0A1B0GVV1 85 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 FAM149AA5PLN7 773 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 C22orf31O95567 290 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 GSTM1P09488 218 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 CTPS1P17812 591 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 PSEN1P49768 467 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 ACSM2AQ08AH3 577 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 MAP2K5Q13163 448 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 BRMS1LQ5PSV4 323 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 HECTD2Q5U5R9 776 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 ACSM2BQ68CK6 577 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 MON1AQ86VX9 555 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 IGDCC3Q8IVU1 814 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 TERB1Q8NA31 727 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 TMEM159Q96B96 161 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 DGCR14Q96DF8 476 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 HBEGFQ99075 208 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 OSBPL11Q9BXB4 747 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 GBA3Q9H227 469 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 DAPK2Q9UIK4 370 aa8.09□□□□□ -1.11
NEK1-208ENST00000512193 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
NEK1-208ENST00000512193 A0A1W2PQH9 124 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 MAP3K13O43283 966 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 ULK1O75385 1050 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 AMHP03971 560 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 CHRNA4P43681 627 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 PIK3CGP48736 1102 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 ALDH9A1P49189 494 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 TUFMP49411 452 aaKnown RBP8.09□□□□□ -1.12
NEK1-208ENST00000512193 CLCNKBP51801 687 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 NRG1Q02297 640 aaPredicted RBP8.09□□□□□ -1.12
NEK1-208ENST00000512193 DSC2Q02487 901 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 SLC25A11Q02978 314 aaKnown RBP8.09□□□□□ -1.12
NEK1-208ENST00000512193 ITGADQ13349 1161 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 SAPCD2Q86UD0 394 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 HEATR4Q86WZ0 1026 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 C8orf59Q8N0T1 100 aaPredicted RBP8.09□□□□□ -1.12
NEK1-208ENST00000512193 ADCY4Q8NFM4 1077 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 PPM1MQ96MI6 270 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 HNRNPABQ99729 332 aaKnown RBP8.09□□□□□ -1.12
NEK1-208ENST00000512193 EMILIN2Q9BXX0 1053 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 EBF3Q9H4W6 596 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 TMPRSS4Q9NRS4 437 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 DNAJC28Q9NX36 388 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 USE1Q9NZ43 259 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 SNX8Q9Y5X2 465 aa8.09□□□□□ -1.12
NEK1-208ENST00000512193 ABLIM1O14639 778 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 LIN7AO14910 233 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 PQBP1O60828 265 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 MLYCDO95822 493 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 RGPD1P0DJD0 1748 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TYMPP19971 482 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 LPOP22079 712 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 IDH2P48735 452 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 HK2P52789 917 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SLC16A1P53985 500 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 AQP4P55087 323 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 IRF8Q02556 426 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 DPYSL2Q16555 572 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 429 ms