RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TIPRLO75663 272 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GSRP00390 522 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 AMHP03971 560 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 HMGN1P05114 100 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CYP3A4P08684 503 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GZMAP12544 262 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 DDCP20711 480 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GLDCP23378 1020 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 HSD17B2P37059 387 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 ARPP19P56211 112 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CCNA1P78396 465 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 UBE3AQ05086 875 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 INCA1Q0VD86 236 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 KRR1Q13601 381 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GARNL3Q5VVW2 1013 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 MBLAC2Q68D91 279 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 ERMP1Q7Z2K6 904 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 VN1R5Q7Z5H4 357 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 PM20D2Q8IYS1 436 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SVOPQ8N4V2 548 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TAS1R2Q8TE23 839 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 PROX1Q92786 737 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 NAP1L4Q99733 375 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 ITM2CQ9NQX7 267 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TOPORSQ9NS56 1045 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SFMBT1Q9UHJ3 866 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 FBXO5Q9UKT4 447 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SNCAIPQ9Y6H5 919 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 MAST2Q6P0Q8 1798 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CNTNAP2Q9UHC6 1331 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 LOC102724428A0A0B4J2F2 783 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 KRT87PA6NCN2 255 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ZBBXA8MT70 800 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 E7ESA3 106 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 F8W810 466 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 NRP1O14786 923 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 AXIN1O15169 862 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PAPSS1O43252 624 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PTP4A3O75365 173 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 VAPBO95292 243 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 C1QAP02745 245 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 F7P08709 466 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 RBP1P09455 135 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ITGALP20701 1170 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 GP5P40197 560 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 CLK2P49760 499 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SIK1P57059 783 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 DYNLT1P63172 113 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 RUNX1T1Q06455 604 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SCRN3Q0VDG4 424 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 BMT2Q1RMZ1 405 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SBK1Q52WX2 424 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 FASTKD1Q53R41 847 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 FAM26DQ5JW98 314 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ANGEL2Q5VTE6 544 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 NXNL2Q5VZ03 156 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 TMEM236Q5W0B7 351 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 FAM219BQ5XKK7 198 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 KIAA1324Q6UXG2 1013 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ZNF767PQ75MW2 155 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 EPHX4Q8IUS5 362 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 FAM71AQ8IYT1 594 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 METTL4Q8N3J2 472 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 NAT16Q8N8M0 369 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 RP9Q8TA86 221 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 NDNFQ8TB73 568 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 URGCPQ8TCY9 931 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 TRPM4Q8TD43 1214 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 CIDECQ96AQ7 238 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 BIRC7Q96CA5 298 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 DUS3LQ96G46 650 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ZNF578Q96N58 590 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 MBOAT7Q96N66 472 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SH2D3AQ9BRG2 576 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 CBWD1Q9BRT8 395 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PI4K2AQ9BTU6 479 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 TRAF4Q9BUZ4 470 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PITHD1Q9GZP4 211 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PCDHAC1Q9H158 963 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 EFCAB1Q9HAE3 211 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PLAC1Q9HBJ0 212 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SIRT5Q9NXA8 310 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SLC17A6Q9P2U8 582 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ZC3H7BQ9UGR2 993 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 BAG5Q9UL15 447 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 MRPS7Q9Y2R9 242 aaKnown RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 FARP1Q9Y4F1 1045 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 IPPQ9Y573 584 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 RNF103-CHMP3A0A140T963 221 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 TCRBV3S1A0A5B6 114 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 HMX2A2RU54 273 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 SGK1O00141 431 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 PLD2O14939 933 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 RFPL1O75677 317 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-208ENST00000511604 WEE2P0C1S8 567 aa7.36□□□□□ -1.23
CPNE4-208ENST00000511604 IL7P13232 177 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms