RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CYTH1Q15438 398 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 UGP2Q16851 508 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 CTC1Q2NKJ3 1217 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 CCDC153Q494R4 210 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 UTP4Q969X6 686 aaKnown RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 TMA16Q96EY4 203 aaKnown RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 PRKD2Q9BZL6 878 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 ARNT2Q9HBZ2 717 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 CFAP97Q9P2B7 532 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 LOC285095A0A1B0GVY8 99 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 NEMP1O14524 444 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 RFPL2O75678 378 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 TMCC1O94876 653 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 SBK3P0C264 359 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 SYN1P17600 705 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 INSCQ1MX18 579 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 MAVSQ7Z434 540 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 PARP9Q8IXQ6 854 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 CMTR2Q8IYT2 770 aaKnown RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 HEXDCQ8WVB3 486 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 OVCA2Q8WZ82 227 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 ISL2Q96A47 359 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 SLC7A6OSQ96CW6 309 aaPredicted RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 PPP1R2P1Q96PQ5 205 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 FAM167BQ9BTA0 163 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 GATA5Q9BWX5 397 aaPredicted RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 FAM96AQ9H5X1 160 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 GOLGA8QA0A0J9YX86 632 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 UBA6A0AVT1 1052 aaPredicted RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 CCDC162PA2VCL2 907 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 GOLGA8OA6NCC3 632 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 A8MX80 341 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 GOLGA8NF8WBI6 632 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 KDELR3O43731 214 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 MPSTP25325 297 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 ERVFC1P60507 584 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 SEMG2Q02383 582 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 C1orf53Q5VUE5 145 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 ASRGL1Q7L266 308 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 TREML1Q86YW5 311 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 WDR75Q8IWA0 830 aaKnown RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 CNTN4Q8IWV2 1026 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 BBS7Q8IWZ6 715 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 TCEAL8Q8IYN2 117 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 APCDD1Q8J025 514 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 FIBCD1Q8N539 461 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
PHF3-209ENST00000509330 MICAL1Q8TDZ2 1067 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 BADQ92934 168 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 TCF25Q9BQ70 676 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 NSMCE4AQ9NXX6 385 aa14.97□□□□□ -0.01
PHF3-209ENST00000509330 INSIG1O15503 277 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 GRIA4P48058 902 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 CDKN1CP49918 316 aaPredicted RBP14.96□□□□□ -0.01
PHF3-209ENST00000509330 FRG1Q14331 258 aaKnown RBP14.96□□□□□ -0.01
PHF3-209ENST00000509330 ZNF697Q5TEC3 545 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 LRRC8EQ6NSJ5 796 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 KLHDC10Q6PID8 442 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 NECAB2Q7Z6G3 386 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 CILP2Q8IUL8 1156 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 OR4K2Q8NGD2 314 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 ANKRD49Q8WVL7 239 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 PSKH2Q96QS6 385 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 MGME1Q9BQP7 344 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 GPAMQ9HCL2 828 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 TLR9Q9NR96 1032 aa14.96□□□□□ -0.01
PHF3-209ENST00000509330 TSR3Q9UJK0 312 aaKnown RBP14.96□□□□□ -0.01
PHF3-209ENST00000509330 CTPS1P17812 591 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 LBX1P52954 281 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 CDKN2DP55273 166 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.02
PHF3-209ENST00000509330 GLT6D1Q7Z4J2 308 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 LONP2Q86WA8 852 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 HERC6Q8IVU3 1022 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 MFN1Q8IWA4 741 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 FBXO27Q8NI29 283 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 PTCD2Q8WV60 388 aaKnown RBP14.96□□□□□ -0.02
PHF3-209ENST00000509330 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.02
PHF3-209ENST00000509330 RPL10LQ96L21 214 aaKnown RBP14.96□□□□□ -0.02
PHF3-209ENST00000509330 TLE6Q9H808 572 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 ARHGEF3Q9NR81 526 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 KCNK4Q9NYG8 393 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 RAI2Q9Y5P3 530 aa14.96□□□□□ -0.02
PHF3-209ENST00000509330 ILVBLA1L0T0 632 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 CD160O95971 181 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 CCDC166P0CW27 439 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 RFC2P35250 354 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 MDGA1Q8NFP4 955 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 ZNF398Q8TD17 642 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 MRPS31Q92665 395 aaKnown RBP14.95□□□□□ -0.02
PHF3-209ENST00000509330 PHF21BQ96EK2 531 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 TBC1D10AQ9BXI6 508 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 WWP1Q9H0M0 922 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 ZBP1Q9H171 429 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 MRM3Q9HC36 420 aaKnown RBP14.95□□□□□ -0.02
PHF3-209ENST00000509330 CCL26Q9Y258 94 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 CEP290O15078 2479 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 MROH6A6NGR9 719 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms