RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PDE5AO76074 875 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 VNN1O95497 513 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 FGFR1OPO95684 399 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 OAS1P00973 400 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 DLDP09622 509 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 CPA1P15085 419 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF12P17014 697 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 HOXB6P17509 224 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 AKAP5P24588 427 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ANXA13P27216 316 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MARK3P27448 753 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TM4SF1P30408 202 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 HOXC9P31274 260 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 HNRNPH3P31942 346 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TCF7P36402 384 aaPredicted RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 HSD17B3P37058 310 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC11A2P49281 568 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TMED10P49755 219 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 RENBPP51606 427 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 COPB1P53618 953 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 GEMIN4P57678 1058 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MAGOHP61326 146 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 GUCY2DQ02846 1103 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT17Q04695 432 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC34A1Q06495 639 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 AP1B1Q10567 949 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 PNOCQ13519 176 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SPCS2Q15005 226 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 LRRC41Q15345 812 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TRIP6Q15654 476 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 BCL2A1Q16548 175 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 LY6KQ17RY6 165 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ZIK1Q3SY52 487 aaPredicted RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ZCWPW2Q504Y3 356 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 FAAH2Q6GMR7 532 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 GALNT17Q6IS24 598 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 PDXDC1Q6P996 788 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 DAAM2Q86T65 1068 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 PATL1Q86TB9 770 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 GRAMD1CQ8IYS0 662 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SPATA5Q8NB90 893 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 GDAP1Q8TB36 358 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 DEPTORQ8TB45 409 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 NEK9Q8TD19 979 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 DDI1Q8WTU0 396 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SCFD1Q8WVM8 642 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MAGOHBQ96A72 148 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MTFMTQ96DP5 389 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 HMCESQ96FZ2 354 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ANKRD36BP1Q96IX9 119 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF333Q96JL9 665 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 LRGUKQ96M69 825 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SNX18Q96RF0 628 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MAP3K14Q99558 947 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 CGRRF1Q99675 332 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 CCT7Q99832 543 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SIKE1Q9BRV8 207 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SPZ1Q9BXG8 430 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 IFIH1Q9BYX4 1025 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 UNKQ9C0B0 810 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 CIPCQ9C0C6 399 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 DDX47Q9H0S4 455 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TMEM60Q9H2L4 133 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 SH2D4AQ9H788 454 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 FGFR1OP2Q9NVK5 253 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 FAIMQ9NVQ4 179 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TRNAU1APQ9NX07 287 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TMOD3Q9NYL9 352 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MTRF1LQ9UGC7 380 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 RASAL2Q9UJF2 1139 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 GABRQQ9UN88 632 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 UTP11Q9Y3A2 253 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 HBS1LQ9Y450 684 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ABCB11O95342 1321 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 STK36Q9NRP7 1315 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 CACNA1IQ9P0X4 2223 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 MKI67P46013 3256 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TIAM2Q8IVF5 1701 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 PNMA6EA0A0J9YXQ4 647 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 KANSL1LA0AUZ9 987 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 BICDL2A1A5D9 508 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TRIM43BA6NCK2 446 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 LGALS16A8MUM7 142 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 E5RJQ4 531 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 F8W8V4 182 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 UBE2Q2LH0YL09 131 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 AP4M1O00189 453 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TIMM44O43615 452 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 TAF5LO75529 589 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 USP1O94782 785 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 BAIAP3O94812 1187 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 CELF2O95319 508 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 ATP5BP06576 529 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT16P08779 473 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 IL1R2P27930 398 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 SERPINB3P29508 390 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT2P35908 639 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 EPS15P42566 896 aa4.7□□□□□ -1.66
PDLIM5-211ENST00000508531 E2F1Q01094 437 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms