RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 WASP42768 502 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 MAGEA6P43360 314 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 DCDC1P59894 354 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 YPEL5P62699 121 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 RACK1P63244 317 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 RPL6Q02878 288 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 CDK18Q07002 472 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 DPTQ07507 201 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 CNTN1Q12860 1018 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 CBLBQ13191 982 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 DHX34Q14147 1143 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 SIX1Q15475 284 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 TEAD4Q15561 434 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 WHAMMP3Q1A5X7 153 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 DUOXA1Q1HG43 343 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 TMEM259Q4ZIN3 620 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ANKRD20A2Q5SQ80 823 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ANKRD20A1Q5TYW2 823 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ANKRD20A3Q5VUR7 823 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 LYSMD4Q5XG99 296 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ARHGAP36Q6ZRI8 547 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 DPPA4Q7L190 304 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 NLRP9Q7RTR0 991 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 MAATS1Q7Z4T9 603 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 TTC7BQ86TV6 843 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ZC3H18Q86VM9 953 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF567Q8N184 647 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 SDR16C5Q8N3Y7 309 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 RYBPQ8N488 228 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 AADATQ8N5Z0 425 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 CNTD1Q8N815 330 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 MNS1Q8NEH6 495 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 KIF18AQ8NI77 898 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 GANCQ8TET4 914 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 PTCD2Q8WV60 388 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 SCG3Q8WXD2 468 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ATOH1Q92858 354 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 KLHL32Q96NJ5 620 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 C1QTNF2Q9BXJ5 285 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 FSD1LQ9BXM9 530 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 NEUROG2Q9H2A3 272 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 TNKS2Q9H2K2 1166 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ERVMER34-1Q9H9K5 563 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 NOD2Q9HC29 1040 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 SMG5Q9UPR3 1016 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 RAI2Q9Y5P3 530 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 GPR179Q6PRD1 2367 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PLXNA2O75051 1894 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 LRRK1Q38SD2 2015 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 A0A0J9YYE9 177 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 A0A1B0GTW7 788 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 A0A1W2PP55 124 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 KLHL33A6NCF5 533 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CAPN8A6NHC0 703 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 GPR89AB7ZAQ6 455 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 KCNK1O00180 336 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 HRO43593 1189 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 TM7SF2O76062 418 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SUN1O94901 812 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 TRBC1P01850 177 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SYPP08247 313 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 GPR89BP0CG08 455 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF883P0CG24 379 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 MLNP12872 115 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 VAV1P15498 845 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 TIMP2P16035 220 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 HNRNPA2B1P22626 353 aaKnown RBP8.51□□□□□ -1.05
PDGFC-205ENST00000506880 RBL1P28749 1068 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 AKT2P31751 481 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 VIPR1P32241 457 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 AFF3P51826 1226 aaKnown RBP8.51□□□□□ -1.05
PDGFC-205ENST00000506880 EPHB1P54762 984 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SKOR1P84550 965 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ADCY2Q08462 1091 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ITKQ08881 620 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ZBTB17Q13105 803 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SGCGQ13326 291 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ZNF211Q13398 564 aaPredicted RBP8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SEMA5AQ13591 1074 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PEX6Q13608 980 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 ARHGEF7Q14155 803 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SLC23A3Q6PIS1 610 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 NPNTQ6UXI9 565 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PPP1R21Q6ZMI0 780 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PARS2Q7L3T8 475 aaKnown RBP8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CREG2Q8IUH2 290 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CBARPQ8N350 705 aaPredicted RBP8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PGBD5Q8N414 524 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 MFSD2AQ8NA29 543 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 SUMF1Q8NBK3 374 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CHST14Q8NCH0 376 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 BBOF1Q8ND07 529 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 OR14C36Q8NHC7 312 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 GRIN3AQ8TCU5 1115 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 CXorf40AQ8TE69 158 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 PIH1D2Q8WWB5 315 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 RUBCNQ92622 972 aa8.51□□□□□ -1.05
PDGFC-205ENST00000506880 VOPP1Q96AW1 172 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms