RNA–Protein interactions for RNA: ENST00000506399.5

SPOP-210, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 5

Gene SPOP, Length 918 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-210ENST00000506399 SPACA3Q8IXA5 215 aa17.14■□□□□ 0.33
SPOP-210ENST00000506399 GRAMD1AQ96CP6 724 aa17.14■□□□□ 0.33
SPOP-210ENST00000506399 SNRNP25Q9BV90 132 aaKnown RBP17.14■□□□□ 0.33
SPOP-210ENST00000506399 HAUS4Q9H6D7 363 aa17.14■□□□□ 0.33
SPOP-210ENST00000506399 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
SPOP-210ENST00000506399 THSD1Q9NS62 852 aa17.14■□□□□ 0.33
SPOP-210ENST00000506399 GULP1Q9UBP9 304 aa17.14■□□□□ 0.33
SPOP-210ENST00000506399 SHROOM3Q8TF72 1996 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 TSPAN11A1L157 253 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 BUB1BO60566 1050 aaPredicted RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 RASGRP1O95267 797 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 FTLP02792 175 aaPredicted RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 PRKCGP05129 697 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 PCCBP05166 539 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 ERCC2P18074 760 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 HK3P52790 923 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 ERVPABLB-1P60509 514 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 TLE3Q04726 772 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 BCL2L1Q07817 233 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 INPP5AQ14642 412 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 TCEA2Q15560 299 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 WSCD2Q2TBF2 565 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 PERM1Q5SV97 790 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 FOXR1Q6PIV2 292 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 RFX8Q6ZV50 586 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 GPR155Q7Z3F1 870 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 GKN2Q86XP6 184 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 SLC35F3Q8IY50 421 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 TSEN2Q8NCE0 465 aaKnown RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 WDR48Q8TAF3 677 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 TSACCQ96A04 125 aaPredicted RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 KCTD15Q96SI1 283 aaPredicted RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 CCDC3Q9BQI4 270 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 APOOQ9BUR5 198 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 CLPBQ9H078 707 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 SIRPGQ9P1W8 387 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 KLQ9UEF7 1012 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 CNOT8Q9UFF9 292 aaKnown RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
SPOP-210ENST00000506399 PADI4Q9UM07 663 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 SATB2Q9UPW6 733 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
SPOP-210ENST00000506399 TMEM191CA6NGB0 347 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 TCEA3O75764 348 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 DXOO77932 396 aaKnown RBP17.12■□□□□ 0.33
SPOP-210ENST00000506399 MIPP30301 263 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 CSNK1DP48730 415 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 POLR2LP62875 67 aaKnown RBP17.12■□□□□ 0.33
SPOP-210ENST00000506399 KLHL30Q0D2K2 578 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 SPIDRQ14159 915 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 NFATC4Q14934 902 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 KCNE4Q8WWG9 221 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 ZNF653Q96CK0 615 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 ATXN7L3BQ96GX2 97 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 SYT11Q9BT88 431 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 EDEM3Q9BZQ6 932 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 ZWILCHQ9H900 591 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 MYO1AQ9UBC5 1043 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 OR1A2Q9Y585 309 aa17.12■□□□□ 0.33
SPOP-210ENST00000506399 TNFP01375 233 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 CELA2BP08218 269 aaPredicted RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 ELFN1P0C7U0 828 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 GZMAP12544 262 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 MMP12P39900 470 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 SCNN1BP51168 640 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 ZNF135P52742 658 aaPredicted RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 SRP54P61011 504 aaKnown RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 IL10RBQ08334 325 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 ALG11Q2TAA5 492 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 LVRNQ6Q4G3 990 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 ZNF571Q7Z3V5 609 aaPredicted RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 PSTKQ8IV42 348 aaKnown RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 SDR16C5Q8N3Y7 309 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 ARL10Q8N8L6 244 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 FNIP1Q8TF40 1166 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 SLC39A7Q92504 469 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 TRIM11Q96F44 468 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 WDR92Q96MX6 357 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 PEBP4Q96S96 227 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
SPOP-210ENST00000506399 GPR34Q9UPC5 381 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 ENTPD2Q9Y5L3 495 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 IGSF10Q6WRI0 2623 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 BAHCC1Q9P281 2608 aa17.11■□□□□ 0.33
SPOP-210ENST00000506399 LRRK1Q38SD2 2015 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 TEX51A0A1B0GUA7 166 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 CACNB4O00305 520 aaPredicted RBP17.1■□□□□ 0.33
SPOP-210ENST00000506399 RGRP47804 291 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 RENBPP51606 427 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 UCNP55089 124 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 TMPRSS3P57727 454 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPOP-210ENST00000506399 MTM1Q13496 603 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 AGERQ15109 404 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 ZSWIM9Q86XI8 627 aa17.1■□□□□ 0.33
SPOP-210ENST00000506399 LZTR1Q8N653 840 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms