RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DNPEPQ9ULA0 475 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 ANKRD36A6QL64 1941 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 CACNA1EQ15878 2313 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 A0A1B0GTW7 788 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 PATE3B3GLJ2 98 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 NEMP1O14524 444 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 BCAT2O15382 392 aaPredicted RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 CEP104O60308 925 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 CPP00450 1065 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 FGGP02679 453 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 MAT2AP31153 395 aaKnown RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 OASLQ15646 514 aaKnown RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 SETMARQ53H47 684 aaPredicted RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 ERAP2Q6P179 960 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 PID1Q7Z2X4 250 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 ZCCHC9Q8N567 271 aaKnown RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 GPR161Q8N6U8 529 aaKnown RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 PDCD6IPQ8WUM4 868 aaKnown RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 ASB12Q8WXK4 309 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 ATG4AQ8WYN0 398 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 PBKQ96KB5 322 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 FCRL5Q96RD9 977 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 MCCC1Q96RQ3 725 aaPredicted RBP25.27■■□□□ 1.64
LSM6-202ENST00000502781 RBM15Q96T37 977 aaKnown RBP eCLIP25.27■■□□□ 1.64
LSM6-202ENST00000502781 HINFPQ9BQA5 517 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 MIR1-1HGQ9H1L0 117 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 SMOC1Q9H4F8 434 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 CAPN10Q9HC96 672 aa25.27■■□□□ 1.64
LSM6-202ENST00000502781 ZNF292O60281 2723 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 KCNN4O15554 427 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 LIASO43766 372 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 PRKCGP05129 697 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 GNSP15586 552 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 NFKB1P19838 968 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 CA4P22748 312 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 RPL26P61254 145 aaKnown RBP25.26■■□□□ 1.63
LSM6-202ENST00000502781 RACK1P63244 317 aaKnown RBP25.26■■□□□ 1.63
LSM6-202ENST00000502781 RALGDSQ12967 914 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 FGL2Q14314 439 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 DPPA4Q7L190 304 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 SCRN2Q96FV2 425 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 TRIB3Q96RU7 358 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 TM9SF3Q9HD45 589 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 TTC7AQ9ULT0 858 aaPredicted RBP25.26■■□□□ 1.63
LSM6-202ENST00000502781 RPL26L1Q9UNX3 145 aaKnown RBP25.26■■□□□ 1.63
LSM6-202ENST00000502781 ZKSCAN5Q9Y2L8 839 aa25.26■■□□□ 1.63
LSM6-202ENST00000502781 PI4KAP42356 2102 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 TRPM6Q9BX84 2022 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 CFAP69A5D8W1 941 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 C5orf60A6NFR6 353 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 PRR5-ARHGAP8B1AHC4 643 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 TRIM61Q5EBN2 209 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 ANKRD20A2Q5SQ80 823 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 ANKRD20A1Q5TYW2 823 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 ANKRD20A3Q5VUR7 823 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 TCEAL6Q6IPX3 200 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 NAPEPLDQ6IQ20 393 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 ADAT2Q7Z6V5 191 aaKnown RBP25.25■■□□□ 1.63
LSM6-202ENST00000502781 TMEM145Q8NBT3 493 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 SPATA22Q8NHS9 363 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 MAIP1Q8WWC4 291 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 TCEAL3Q969E4 200 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 SPATA13Q96N96 652 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 WDR24Q96S15 920 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 SLC17A9Q9BYT1 436 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 PCDH9Q9HC56 1237 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 CHKBQ9Y259 395 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 WDR87Q6ZQQ6 2873 aa25.25■■□□□ 1.63
LSM6-202ENST00000502781 FRYLO94915 3013 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 IGLON5A6NGN9 336 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 WNT9AO14904 365 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 KHNYNO15037 678 aaKnown RBP25.24■■□□□ 1.63
LSM6-202ENST00000502781 FOXD2O60548 495 aaPredicted RBP25.24■■□□□ 1.63
LSM6-202ENST00000502781 MT-CYBP00156 380 aaPredicted RBP25.24■■□□□ 1.63
LSM6-202ENST00000502781 CCNG2Q16589 344 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 DRICH1Q6PGQ1 229 aaPredicted RBP25.24■■□□□ 1.63
LSM6-202ENST00000502781 PAF1Q8N7H5 531 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 C1orf54Q8WWF1 131 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 RTP4Q96DX8 246 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 SERAC1Q96JX3 654 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 OSBPL9Q96SU4 736 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 GBA3Q9H227 469 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 B4GALT6Q9UBX8 382 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 SNX12Q9UMY4 172 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 SLC6A14Q9UN76 642 aa25.24■■□□□ 1.63
LSM6-202ENST00000502781 A0A0J9YYE9 177 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 PRAMEF26H0Y7S4 382 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 CES2O00748 559 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 MMP20O60882 483 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 OPHN1O60890 802 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 STK10O94804 968 aaKnown RBP25.23■■□□□ 1.63
LSM6-202ENST00000502781 TRBC1P01850 177 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 PRLRP16471 622 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 GRIA4P48058 902 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 AFF3P51826 1226 aaKnown RBP25.23■■□□□ 1.63
LSM6-202ENST00000502781 GNG11P61952 73 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 FAM193AP78312 1265 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 IRX4P78413 519 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 SF3A2Q15428 464 aaKnown RBP25.23■■□□□ 1.63
LSM6-202ENST00000502781 ITPRIPL1Q6GPH6 555 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms