RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 USP1O94782 785 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 HTR3BO95264 441 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 RHOQP17081 205 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 AMPD1P23109 780 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 ADORA2BP29275 332 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 GMPRP36959 345 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 MMP16P51512 607 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 CCNG1P51959 295 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 AP2B1P63010 937 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 CRYMQ14894 314 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 KPNB1Q14974 876 aaKnown RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 ACSBG2Q5FVE4 666 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 ZNF484Q5JVG2 852 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 ZNF618Q5T7W0 954 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 TAPT1Q6NXT6 567 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 MTHFD1LQ6UB35 978 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 TMEM110Q86TL2 294 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 ERO1BQ86YB8 467 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 ZNF784Q8NCA9 323 aaPredicted RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 OR6B3Q8NGW1 331 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 ADAMTS15Q8TE58 950 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 C17orf50Q8WW18 174 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 DCPSQ96C86 337 aaKnown RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 LGMNQ99538 433 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 SLC4A5Q9BY07 1137 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 PDE7BQ9NP56 450 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 TCF7L2Q9NQB0 619 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 AKAP7Q9P0M2 348 aaPredicted RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 HESX1Q9UBX0 185 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 TUBD1Q9UJT1 453 aa9.04□□□□□ -0.96
FN1-227ENST00000498719 MTO1Q9Y2Z2 717 aaKnown RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 TRIP12Q14669 1992 aaPredicted RBP9.04□□□□□ -0.96
FN1-227ENST00000498719 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 KRT87PA6NCN2 255 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 TGFBR3LH3BV60 316 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 FOXD2O60548 495 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 KRT36O76013 467 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 SNRNP70P08621 437 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 NME1P15531 152 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 GOT1P17174 413 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 LMO2P25791 158 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 SLC8A3P57103 927 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 SLC26A5P58743 744 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 PDCD1Q15116 288 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 SPDYAQ5MJ70 313 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 WASHC2DQ5SRD0 308 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 MARCH8Q5T0T0 291 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 ENDOVQ8N8Q3 282 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 FBXO30Q8TB52 745 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 DTX3LQ8TDB6 740 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 ZNF670Q9BS34 389 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 C16orf70Q9BSU1 422 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 APOL6Q9BWW8 343 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 FAM49AQ9H0Q0 323 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 INTS10Q9NVR2 710 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 AP4E1Q9UPM8 1137 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 A8MXQ7 604 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 MDM4O15151 490 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 ENO1P06733 434 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 PDHA1P08559 390 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 F7P08709 466 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 VAV1P15498 845 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 YY1P25490 414 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 HOXA11P31270 313 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 MAGEA3P43357 314 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 AGFG1P52594 562 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 PITX1P78337 314 aaPredicted RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 CCNA1P78396 465 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 NFE2L1Q14494 772 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 RCN1Q15293 331 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 CTXN3Q4LDR2 81 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 BSPRYQ5W0U4 402 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 CASC4Q6P4E1 433 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 DCLRE1AQ6PJP8 1040 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 FAM131BQ86XD5 332 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 NUDCD3Q8IVD9 361 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 ADGRF2Q8IZF7 708 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 CEP70Q8NHQ1 597 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 TEKT4Q8WW24 435 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 PTP4A1Q93096 173 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 MCUR1Q96AQ8 359 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 C1GALT1C1Q96EU7 318 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 CSPG4P5Q96PW8 444 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 EBNA1BP2Q99848 306 aaKnown RBP9.03□□□□□ -0.96
FN1-227ENST00000498719 EBF4Q9BQW3 602 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 DTLQ9NZJ0 730 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 COX16Q9P0S2 106 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 KIAA1257Q9ULG3 409 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 COQ6Q9Y2Z9 468 aa9.03□□□□□ -0.96
FN1-227ENST00000498719 RGSL1A5PLK6 1076 aa9.02□□□□□ -0.97
FN1-227ENST00000498719 AQP12BA6NM10 295 aa9.02□□□□□ -0.97
FN1-227ENST00000498719 A8MVJ9 347 aa9.02□□□□□ -0.97
FN1-227ENST00000498719 I3L4J1 428 aa9.02□□□□□ -0.97
FN1-227ENST00000498719 ATXN7O15265 892 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms